RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TRPC4APQ8TEL6 797 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 CHTF18Q8WVB6 975 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 SARAFQ96BY9 339 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 TM4SF18Q96CE8 201 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 HBEGFQ99075 208 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 DOHHQ9BU89 302 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 C1QTNF3Q9BXJ4 246 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 ELOVL6Q9H5J4 265 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 EXO5Q9H790 373 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 ACKR4Q9NPB9 350 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 AHSPQ9NZD4 102 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 TMEM216Q9P0N5 145 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 BOKQ9UMX3 212 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-204ENST00000547486 SLC12A4Q9UP95 1085 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 DTX4Q9Y2E6 619 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 PCDHA9Q9Y5H5 950 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 NPFFR2Q9Y5X5 522 aa12.25□□□□□ -0.45
CPSF6-204ENST00000547486 AKAP9Q99996 3911 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 A0A087WUV0 522 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 ANKRD33BA6NCL7 494 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 KDM4EB2RXH2 506 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 WDR1O75083 606 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 OR4F21O95013 312 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 OTCP00480 354 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 SNRPAP09012 282 aaKnown RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 HOXD4P09016 255 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 CTAGE8P0CG41 777 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 PORP16435 677 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 FEN1P39748 380 aaKnown RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 ZFP36L2P47974 494 aaKnown RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 TRPC1P48995 793 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 MAPK12P53778 367 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 DLX5P56178 289 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 DUSP2Q05923 314 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 GLE1Q53GS7 698 aaKnown RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 UNC50Q53HI1 259 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 TCHHL1Q5QJ38 904 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 TEX35Q5T0J7 233 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 C10orf62Q5T681 223 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-204ENST00000547486 C1orf185Q5T7R7 199 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 DESI1Q6ICB0 168 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 FAM180BQ6P0A1 224 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 SLC48A1Q6P1K1 146 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 SEM1Q6ZVN7 128 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 TAOK1Q7L7X3 1001 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 PAGE2Q7Z2X7 111 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 CTAGE4Q8IX94 777 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 PRR22Q8IZ63 422 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 NEIL3Q8TAT5 605 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 SPPL2AQ8TCT8 520 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 SELENOMQ8WWX9 145 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 DIO2Q92813 273 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 NTNG2Q96CW9 530 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 GNRHR2Q96P88 292 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 ANGPTL4Q9BY76 406 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 NFU1Q9UMS0 254 aa12.24□□□□□ -0.45
CPSF6-204ENST00000547486 POLQO75417 2590 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 DLX3O60479 287 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 CHN1P15882 459 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 CAPN3P20807 821 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 GPX3P22352 226 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 CASP3P42574 277 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 CLCQ05315 142 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 MAP4K2Q12851 820 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 EXOSC7Q15024 291 aaKnown RBP12.23□□□□□ -0.45
CPSF6-204ENST00000547486 PRICKLE4Q2TBC4 344 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 HLA-DQA1Q5Y7H0 255 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 TMEM198Q66K66 360 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 TIFABQ6ZNK6 161 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 C1orf52Q8N6N3 182 aaKnown RBP12.23□□□□□ -0.45
CPSF6-204ENST00000547486 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 ADCY4Q8NFM4 1077 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 MYRIPQ8NFW9 859 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 OR7G1Q8NGA0 311 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF681Q96N22 645 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 RILPQ96NA2 401 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 TIMP4Q99727 224 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 NXF5Q9H1B4 397 aaKnown RBP12.23□□□□□ -0.45
CPSF6-204ENST00000547486 UBQLN3Q9H347 655 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 BRF2Q9HAW0 419 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
CPSF6-204ENST00000547486 QPCTLQ9NXS2 382 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 TRPS1Q9UHF7 1281 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF639Q9UID6 485 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 SNX6Q9UNH7 406 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 DNAJC13O75165 2243 aa12.23□□□□□ -0.45
CPSF6-204ENST00000547486 EXOC1LA0A1B0GW35 172 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 C1orf226A1L170 272 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 CAPN14A8MX76 684 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 MANBAO00462 879 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 TP53I11O14683 189 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 ERAL1O75616 437 aaKnown RBP12.22□□□□□ -0.45
CPSF6-204ENST00000547486 TRAPPC6AO75865 159 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 ABCB1P08183 1280 aaPredicted RBP12.22□□□□□ -0.45
CPSF6-204ENST00000547486 GABRA1P14867 456 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 CSNK2A2P19784 350 aaPredicted RBP12.22□□□□□ -0.45
CPSF6-204ENST00000547486 GDF1P27539 372 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 ABCD3P28288 659 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 RPS6KA2Q15349 733 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 TESK1Q15569 626 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms