RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TRAV19A0A0A6YYK7 116 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TRDV1A0A1B0GX56 115 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 MEIOCA2RUB1 952 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 K7ERQ8 282 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 SYT5O00445 386 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PRRG1O14668 218 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CASC3O15234 703 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 YY2O15391 372 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 SH3BP5O60239 455 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM127O75204 238 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CYP7B1O75881 506 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 C6orf47O95873 294 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CXCL10P02778 98 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 RPN2P04844 631 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 HSMCR30P0CW71 290 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PRKAR1AP10644 381 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 SPNP16150 400 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 DDCP20711 480 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 FUT4P22083 530 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 LHCGRP22888 699 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 MYL9P24844 172 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GTF2E2P29084 291 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 IMPA1P29218 277 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PPP2R1BP30154 601 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GABRA5P31644 462 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GRK5P34947 590 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CNR2P34972 360 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 NUDT1P36639 197 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TM4SF4P48230 202 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 KCNJ5P48544 419 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 SMSP52788 366 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 WNT4P56705 351 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ARPC4P59998 168 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 RPS13P62277 151 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 BTG1P62324 171 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF91Q05481 1191 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 C2orf80Q0P641 193 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GPAT3Q53EU6 434 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TM4SF20Q53R12 229 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 YIF1BQ5BJH7 314 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ENTPD8Q5MY95 495 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 BICRALQ6AI39 1079 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CD200R1LQ6Q8B3 271 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PRSS55Q6UWB4 352 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 LCTLQ6UWM7 567 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM64Q6YI46 380 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 FAM83HQ6ZRV2 1179 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 DPPA4Q7L190 304 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 HDDC2Q7Z4H3 204 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 NRARPQ7Z6K4 114 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TSPAN33Q86UF1 283 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 C12orf40Q86WS4 652 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PHC2Q8IXK0 858 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 APCDD1Q8J025 514 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 NAT16Q8N8M0 369 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GALNT11Q8NCW6 608 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PSD4Q8NDX1 1056 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 OR7G1Q8NGA0 311 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 OR10Q1Q8NGQ4 319 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 OR9A1PQ8NGU1 263 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 BBS10Q8TAM1 723 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ZFAND1Q8TCF1 268 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CREB3L4Q8TEY5 395 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 SLC5A11Q8WWX8 675 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 UFD1Q92890 307 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 NINJ1Q92982 152 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 KISS1RQ969F8 398 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 RFKQ969G6 155 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GLYATL1Q969I3 302 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 UBE2FQ969M7 185 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF689Q96CS4 500 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 AP2M1Q96CW1 435 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 OTUB2Q96DC9 234 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ZBED6CLQ96FA7 236 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ST6GAL2Q96JF0 529 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 MTERF1Q99551 399 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 FUZQ9BT04 418 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 YIPF2Q9BWQ6 316 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GTPBP2Q9BX10 602 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 POLR2J2Q9GZM3 115 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ATG10Q9H0Y0 220 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 POLR2J3Q9H1A7 115 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 RHBGQ9H310 441 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 EVA1AQ9H8M9 152 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TRIM45Q9H8W5 580 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 RNF121Q9H920 327 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 BCL2L10Q9HD36 194 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 RPRD1BQ9NQG5 326 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 MIEF1Q9NQG6 463 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PAK6Q9NQU5 681 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PRDM8Q9NQV8 689 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 MRPL17Q9NRX2 175 aaKnown RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF275Q9NSD4 429 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-225ENST00000545920 GPATCH2Q9NW75 528 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ASB6Q9NWX5 421 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 ING3Q9NXR8 418 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 CALML5Q9NZT1 146 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 TMPRSS11EQ9UL52 423 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms