RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CRB3Q9BUF7 120 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 IKZF5Q9H5V7 419 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 PIF1Q9H611 641 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
CD4-208ENST00000538827 ZCCHC3Q9NUD5 404 aaKnown RBP13.24□□□□□ -0.29
CD4-208ENST00000538827 DDX18Q9NVP1 670 aaKnown RBP13.24□□□□□ -0.29
CD4-208ENST00000538827 PCDHGA3Q9Y5H0 932 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 TENM4Q6N022 2769 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 CELSR3Q9NYQ7 3312 aa13.24□□□□□ -0.29
CD4-208ENST00000538827 SEC16AO15027 2179 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 KRT75O95678 551 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 C1QCP02747 245 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 ATP1B1P05026 303 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 CCNYL3P0C7X3 344 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 SLC35E2P0CK97 266 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 TCN1P20061 433 aaPredicted RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 PPIBP23284 216 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 RBMS1P29558 406 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 SLC5A2P31639 672 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 SOX11P35716 441 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 STT3AP46977 705 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 CCT3P49368 545 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 PGDP52209 483 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 CASP9P55211 416 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 IGLV3-21P80748 117 aaPredicted RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 NCF4Q15080 339 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 NKG7Q16617 165 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 CYP51A1Q16850 503 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 ZNF628Q5EBL2 1059 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 SAMD4BQ5PRF9 694 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 FAM111BQ6SJ93 734 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 IFNEQ86WN2 208 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 GALNT12Q8IXK2 581 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 SLC15A3Q8IY34 581 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 ST13P4Q8IZP2 240 aaPredicted RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 CACTIN-AS1Q8N1I8 211 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 FAM156AQ8NDB6 213 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 OR56A1Q8NGH5 318 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 FBXO30Q8TB52 745 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 ZFP90Q8TF47 636 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 CT55Q8WUE5 264 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 FAM120BQ96EK7 910 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 SH3GL1Q99961 368 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 KCTD14Q9BQ13 255 aaPredicted RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 ECSITQ9BQ95 431 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 CNPPD1Q9BV87 410 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 ANKRA2Q9H9E1 313 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 AKIRIN1Q9H9L7 192 aaPredicted RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 POLR1BQ9H9Y6 1135 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 TPT1P8Q9HAU6 139 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 C3orf14Q9HBI5 128 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 EQTNQ9NQ60 294 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 TMEM181Q9P2C4 612 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 GMPR2Q9P2T1 348 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 ABCD2Q9UBJ2 740 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
CD4-208ENST00000538827 CORO2BQ9UQ03 480 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 UNC79Q9P2D8 2635 aa13.23□□□□□ -0.29
CD4-208ENST00000538827 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 EMC8O43402 210 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 RAD1O60671 282 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 CNOT3O75175 753 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 SORBS2O94875 1100 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 ONECUT2O95948 504 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ALBP02768 609 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 CT62P0C5K7 136 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 CRATP43155 626 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 GSK3BP49841 420 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 EFNA3P52797 238 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 EMP2P54851 167 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 PRR5P85299 388 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 LIPEQ05469 1076 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ZNF155Q12901 538 aaPredicted RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 CEACAM7Q14002 265 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 NSDHLQ15738 373 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.22□□□□□ -0.29
CD4-208ENST00000538827 TNFAIP8L2Q6P589 184 aaPredicted RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 TMEM64Q6YI46 380 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 DGAT2L6Q6ZPD8 337 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 LANCL3Q6ZV70 420 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 TMPRSS7Q7RTY8 843 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 LAPTM4BQ86VI4 370 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 RNF130Q86XS8 419 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 HPS6Q86YV9 775 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 TMEM151BQ8IW70 566 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ESX1Q8N693 406 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ENDOVQ8N8Q3 282 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 NUP43Q8NFH3 380 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 OR7G2Q8NG99 324 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 OR10A6Q8NH74 314 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 METTL21AQ8WXB1 218 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 JADE3Q92613 823 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 UTP4Q969X6 686 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 MOAP1Q96BY2 351 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 ELP4Q96EB1 424 aa13.22□□□□□ -0.29
CD4-208ENST00000538827 RBM18Q96H35 190 aaKnown RBP13.22□□□□□ -0.29
CD4-208ENST00000538827 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms