RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CNTRLQ7Z7A1 2325 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 GOLGA8QA0A0J9YX86 632 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 GOLGA8OA6NCC3 632 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 GOLGA8NF8WBI6 632 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 HDAC3O15379 428 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 OR6B1O95007 311 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 ALDOCP09972 364 aaKnown RBP16.56■□□□□ 0.24
DDX55-204ENST00000536079 TRHRP34981 398 aaPredicted RBP16.56■□□□□ 0.24
DDX55-204ENST00000536079 TLR1Q15399 786 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 SLC9B1Q4ZJI4 515 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 FHL5Q5TD97 284 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 LYPD8Q6UX82 237 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 RNF111Q6ZNA4 994 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 HOMEZQ8IX15 550 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 VWA5B2Q8N398 1253 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 CISD2Q8N5K1 135 aaKnown RBP16.56■□□□□ 0.24
DDX55-204ENST00000536079 ZNF441Q8N8Z8 693 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 OR7G2Q8NG99 324 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 OR52R1Q8NGF1 315 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 CKAP2Q8WWK9 683 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 ART5Q96L15 291 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 BBS4Q96RK4 519 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 GAL3ST4Q96RP7 486 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 UTP23Q9BRU9 249 aaKnown RBP16.56■□□□□ 0.24
DDX55-204ENST00000536079 WWTR1Q9GZV5 400 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 TRIM45Q9H8W5 580 aaPredicted RBP16.56■□□□□ 0.24
DDX55-204ENST00000536079 ENTPD4Q9Y227 616 aa16.56■□□□□ 0.24
DDX55-204ENST00000536079 TTLL8A6PVC2 850 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 DYRK3O43781 588 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 TBX19O60806 448 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 EPHA3P29320 983 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 SOX3P41225 446 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 HLCSP50747 726 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 NCBP2P52298 156 aaKnown RBP eCLIP16.55■□□□□ 0.243e-7■□□□□ 10.4
DDX55-204ENST00000536079 OC90Q02509 493 aaPredicted RBP16.55■□□□□ 0.24
DDX55-204ENST00000536079 TLE1Q04724 770 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 IGFBP7Q16270 282 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 PIGGQ5H8A4 983 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 TMEM64Q6YI46 380 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 ZNF551Q7Z340 670 aaPredicted RBP16.55■□□□□ 0.24
DDX55-204ENST00000536079 RIMKLAQ8IXN7 391 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 C16orf52Q8NHV5 167 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 NUBPLQ8TB37 319 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 ZNF675Q8TD23 568 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 LRRC8CQ8TDW0 803 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 ADIPOR1Q96A54 375 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 PPCDCQ96CD2 204 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 SNRNP40Q96DI7 357 aaKnown RBP16.55■□□□□ 0.24
DDX55-204ENST00000536079 AMDHD1Q96NU7 426 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 TAAR6Q96RI8 345 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 ACBD3Q9H3P7 528 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 KLHL1Q9NR64 748 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 ASIC5Q9NY37 505 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 LRFN1Q9P244 771 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 ATP6V1HQ9UI12 483 aa16.55■□□□□ 0.24
DDX55-204ENST00000536079 YARS2Q9Y2Z4 477 aaKnown RBP16.55■□□□□ 0.24
DDX55-204ENST00000536079 FCHO1O14526 889 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 SCAMP2O15127 329 aaKnown RBP16.54■□□□□ 0.24
DDX55-204ENST00000536079 PRAMEF2O60811 474 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 WISP2O76076 250 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 LAMP1P11279 417 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 PRPS2P11908 318 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 PLA2G2AP14555 144 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 LBPP18428 481 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 MAPK1P28482 360 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 EMDP50402 254 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 SSR4P51571 173 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 INPP5JQ15735 1006 aaPredicted RBP16.54■□□□□ 0.24
DDX55-204ENST00000536079 ZNF766Q5HY98 468 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 MDGA2Q7Z553 956 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 ZNF605Q86T29 641 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 FAM9CQ8IZT9 166 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 OR7G1Q8NGA0 311 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 OR5L2Q8NGL0 311 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 PIWIL2Q8TC59 973 aaKnown RBP16.54■□□□□ 0.24
DDX55-204ENST00000536079 DYDC1Q8WWB3 177 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 C7orf26Q96N11 449 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 OR52B2Q96RD2 323 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 GIMAP4Q9NUV9 329 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 SH3BP4Q9P0V3 963 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 ABI3Q9P2A4 366 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 BCAP29Q9UHQ4 241 aa16.54■□□□□ 0.24
DDX55-204ENST00000536079 EIF3LQ9Y262 564 aaKnown RBP16.54■□□□□ 0.24
DDX55-204ENST00000536079 TRAV17A0A0B4J275 112 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 OR6C76A6NM76 312 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 ANKRD28O15084 1053 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 PDPK1O15530 556 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 GPX3P22352 226 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 MPIP34949 423 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 MC3RP41968 323 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 FRKP42685 505 aaPredicted RBP16.53■□□□□ 0.24
DDX55-204ENST00000536079 ASMTP46597 345 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 CYB561P49447 251 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 NR0B1P51843 470 aaKnown RBP16.53■□□□□ 0.24
DDX55-204ENST00000536079 PMP22Q01453 160 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 SMU1Q2TAY7 513 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 TMEM107Q6UX40 140 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 IL20RBQ6UXL0 311 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 FAM47EQ6ZV65 393 aa16.53■□□□□ 0.24
DDX55-204ENST00000536079 TMEM156Q8N614 296 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms