RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SCMH1Q96GD3 660 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF764Q96H86 408 aaPredicted RBP21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 BARD1Q99728 777 aaKnown RBP21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 WWTR1Q9GZV5 400 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 OR10A5Q9H207 317 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 PCDHGB6Q9Y5F9 930 aa21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 COPG1Q9Y678 874 aaKnown RBP21.05■□□□□ 0.96
SFSWAP-204ENST00000535399 MYO1GB0I1T2 1018 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 AKAP10O43572 662 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 TBX19O60806 448 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 OR6B1O95007 311 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 LRATO95237 230 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 NADKO95544 446 aaPredicted RBP21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 CBX7O95931 251 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 PCSK2P16519 638 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 MAPK1P28482 360 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 ASMTP46597 345 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 INAQ16352 499 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 TRMT12Q53H54 448 aaKnown RBP21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 IL23RQ5VWK5 629 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 SLC29A4Q7RTT9 530 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 LIX1Q8N485 282 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 HORMAD2Q8N7B1 307 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF441Q8N8Z8 693 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 FNDC5Q8NAU1 212 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 SIMC1Q8NDZ2 872 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 PPP1R36Q96LQ0 422 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 BBS4Q96RK4 519 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 C1orf50Q9BV19 199 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 NUF2Q9BZD4 464 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 REEP4Q9H6H4 257 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 AKTIPQ9H8T0 292 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 KLHL1Q9NR64 748 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 ASF1BQ9NVP2 202 aa21.04■□□□□ 0.96
SFSWAP-204ENST00000535399 UQCRHLA0A096LP55 91 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 SLC25A12O75746 678 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 SP1P08047 785 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 CD46P15529 392 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 MPIP34949 423 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 SOX3P41225 446 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 MRPS35P82673 323 aaKnown RBP21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 PDE7AQ13946 482 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 EXOSC7Q15024 291 aaKnown RBP21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 SMU1Q2TAY7 513 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 ZNF385BQ569K4 471 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 SLC25A25Q6KCM7 469 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 ANKRD26P1Q6NSI1 321 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 GPALPP1Q8IXQ4 340 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 FAM9CQ8IZT9 166 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 C16orf52Q8NHV5 167 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 ASB15Q8WXK1 588 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 C5orf34Q96MH7 638 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 TAAR6Q96RI8 345 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 GAL3ST4Q96RP7 486 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 MEAF6Q9HAF1 191 aa21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 HELZ2Q9BYK8 2649 aaKnown RBP21.03■□□□□ 0.96
SFSWAP-204ENST00000535399 PRPS2P11908 318 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 PPP2R2AP63151 447 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 EMX2Q04743 252 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 LYPD8Q6UX82 237 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 CYP4Z2PQ8N1L4 340 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 OR52R1Q8NGF1 315 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 GRHL3Q8TE85 626 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 KAT2AQ92830 837 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 ADIPOR1Q96A54 375 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 ERP27Q96DN0 273 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 AMDHD1Q96NU7 426 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 GLIPR2Q9H4G4 154 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 ASIC5Q9NY37 505 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 MAP10Q9P2G4 905 aa21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 MARCOQ9UEW3 520 aaPredicted RBP21.02■□□□□ 0.96
SFSWAP-204ENST00000535399 PRRC2CQ9Y520 2896 aaKnown RBP21.02■□□□□ 0.95
SFSWAP-204ENST00000535399 C2orf92A0A1B0GVN3 265 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 A8MVJ9 347 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 NME2P1O60361 137 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 NME2P22392 152 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 NTSP30990 170 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 NCBP2P52298 156 aaKnown RBP eCLIP21.01■□□□□ 0.958e-14■■■■□ 21.9
SFSWAP-204ENST00000535399 IL20RBQ6UXL0 311 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 MDGA2Q7Z553 956 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 SLC15A4Q8N697 577 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 PPCDCQ96CD2 204 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 ACBD3Q9H3P7 528 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 ANKRA2Q9H9E1 313 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 HPF1Q9NWY4 346 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 BCAP29Q9UHQ4 241 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 ATP6V1HQ9UI12 483 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 EIF3LQ9Y262 564 aaKnown RBP21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 DTX4Q9Y2E6 619 aa21.01■□□□□ 0.95
SFSWAP-204ENST00000535399 SDHDO14521 159 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 HDAC3O15379 428 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 PLOD3O60568 738 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 RASAL1O95294 804 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 G6PDP11413 515 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 GPX3P22352 226 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 EMDP50402 254 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 MAD2L1Q13257 205 aaPredicted RBP21■□□□□ 0.95
SFSWAP-204ENST00000535399 PTGR1Q14914 329 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 MAPKAPK3Q16644 382 aa21■□□□□ 0.95
SFSWAP-204ENST00000535399 ZNF791Q3KP31 576 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms