RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ATP1B1P05026 303 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 C8orf89P0DMQ9 161 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 CPMP14384 443 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 ST6GAL1P15907 406 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 TYRP1P17643 537 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 CRHBPP24387 322 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 OR1E2P47887 323 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 LIMS1P48059 325 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 AFF3P51826 1226 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 CDH12P55289 794 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 C21orf59P57076 290 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 RAB38P57729 211 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 VSX2P58304 361 aaPredicted RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 HPCAP84074 193 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 NPRL3Q12980 569 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 MAPK11Q15759 364 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 RPS26P11Q5JNZ5 115 aaPredicted RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 C6orf141Q5SZD1 244 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 GARNL3Q5VVW2 1013 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 BROXQ5VW32 411 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 ZCCHC12Q6PEW1 402 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 ZNF773Q6PK81 442 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 ISLR2Q6UXK2 745 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 TAGAPQ8N103 731 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 OR2L13Q8N349 312 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 PITX2Q99697 317 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 TUBA1CQ9BQE3 449 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 YIPF3Q9GZM5 350 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 RIBC2Q9H4K1 309 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 ERVMER34-1Q9H9K5 563 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 PAPOLBQ9NRJ5 636 aaKnown RBP12.6□□□□□ -0.39
BEST1-208ENST00000534553 SIT1Q9Y3P8 196 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 HCN4Q9Y3Q4 1203 aa12.6□□□□□ -0.39
BEST1-208ENST00000534553 SYT5O00445 386 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 MRPS14O60783 128 aaKnown RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 CCNB2O95067 398 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 HOXA6P31267 233 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 MAZP56270 477 aaKnown RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 CSNK2BP67870 215 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 SYPL1Q16563 259 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 C14orf28Q4W4Y0 310 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 CDC73Q6P1J9 531 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 PARP8Q8N3A8 854 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 CHDHQ8NE62 594 aaPredicted RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 OR5D16Q8NGK9 328 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 ZNF675Q8TD23 568 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 ADAMTS15Q8TE58 950 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 ZDHHC12Q96GR4 267 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 MAGED4Q96JG8 741 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 DHRS1Q96LJ7 313 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 OR7D2Q96RA2 312 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 PINK1Q9BXM7 581 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 KLHL25Q9H0H3 589 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 RBM38Q9H0Z9 239 aaKnown RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 IL21RQ9HBE5 538 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 ACER3Q9NUN7 267 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 GIN1Q9NXP7 522 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 TMCC3Q9ULS5 477 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 MRPS33Q9Y291 106 aaKnown RBP12.59□□□□□ -0.39
BEST1-208ENST00000534553 NAALAD2Q9Y3Q0 740 aa12.59□□□□□ -0.39
BEST1-208ENST00000534553 TLCD2A6NGC4 264 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 WASHC1A8K0Z3 465 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 ZNF701M0R085 212 aaPredicted RBP12.58□□□□□ -0.4
BEST1-208ENST00000534553 GPR75O95800 540 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 TNFRSF1BP20333 461 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 EEF1B2P24534 225 aaKnown RBP12.58□□□□□ -0.4
BEST1-208ENST00000534553 MAN2A2P49641 1150 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 IL1RL1Q01638 556 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 DUSP2Q05923 314 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 CD47Q08722 323 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 FAM53BQ14153 422 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 PUM1Q14671 1186 aaKnown RBP eCLIP12.58□□□□□ -0.4
BEST1-208ENST00000534553 PRTGQ2VWP7 1150 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 FAM214AQ32MH5 1076 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 TCTE1Q5JU00 501 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 MFSD12Q6NUT3 480 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 RBM44Q6ZP01 1051 aaKnown RBP12.58□□□□□ -0.4
BEST1-208ENST00000534553 GPR141Q7Z602 305 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 GALNT5Q7Z7M9 940 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 MCATQ8IVS2 390 aaKnown RBP12.58□□□□□ -0.4
BEST1-208ENST00000534553 SFTPA2Q8IWL1 248 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 CA13Q8N1Q1 262 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 GPR32P1Q8NGA4 272 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 NCSTNQ92542 709 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 PMM1Q92871 262 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 HRASLS5Q96KN8 279 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 CNDP2Q96KP4 475 aaKnown RBP12.58□□□□□ -0.4
BEST1-208ENST00000534553 GUCD1Q96NT3 240 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 FEVQ99581 238 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 ADNPQ9H2P0 1102 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 ACAD8Q9UKU7 415 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 CSNK1G3Q9Y6M4 447 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 DSPPQ9NZW4 1301 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 A0A1B0GTW7 788 aa12.58□□□□□ -0.4
BEST1-208ENST00000534553 PRAMEF25A6NGN4 478 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms