RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 MAP1AP78559 2803 aaPredicted RBP12.95□□□□□ -0.34
SF3B2-215ENST00000534307 FBN3Q75N90 2809 aa12.95□□□□□ -0.34
SF3B2-215ENST00000534307 NCKAP5O14513 1909 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 UBFD1O14562 309 aaKnown RBP12.94□□□□□ -0.34
SF3B2-215ENST00000534307 GUCY1B2O75343 617 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ULK1O75385 1050 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ESRRBO95718 433 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PROCP04070 461 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ATP1B1P05026 303 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ENO1P06733 434 aaKnown RBP12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PORP16435 677 aaPredicted RBP12.94□□□□□ -0.34
SF3B2-215ENST00000534307 HTR1EP28566 365 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PIGAP37287 484 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 MAGEA5P43359 124 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 SMSP52788 366 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PKNOX1P55347 436 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 TRA2BP62995 288 aaKnown RBP12.94□□□□□ -0.34
SF3B2-215ENST00000534307 RAE1P78406 368 aaKnown RBP12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PLGLB1Q02325 96 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 DUSP2Q05923 314 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 DUSP8Q13202 625 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PRICKLE4Q2TBC4 344 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 SLC22A10Q63ZE4 541 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ZYG11AQ6WRX3 759 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 FBXW8Q8N3Y1 598 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 MARVELD2Q8N4S9 558 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 C17orf47Q8NEP4 570 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 OR7G1Q8NGA0 311 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 METTL6Q8TCB7 284 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ADIPOR1Q96A54 375 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF681Q96N22 645 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 PPCSQ9HAB8 311 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 NMRK1Q9NWW6 199 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF639Q9UID6 485 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 MCM8Q9UJA3 840 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 CNOT11Q9UKZ1 510 aaKnown RBP12.94□□□□□ -0.34
SF3B2-215ENST00000534307 STK38LQ9Y2H1 464 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 LIPGQ9Y5X9 500 aa12.94□□□□□ -0.34
SF3B2-215ENST00000534307 C2orf92A0A1B0GVN3 265 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 SERTM1A2A2V5 107 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 LRRC3CA6NJW4 275 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF500O60304 480 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-215ENST00000534307 PLIN3O60664 434 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 GLRA3O75311 464 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 CLDN14O95500 239 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 TPOP07202 933 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 CELA3AP09093 270 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 SERPINB3P29508 390 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 MAP4K2Q12851 820 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 GALNT18Q6P9A2 607 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 VWA5B2Q8N398 1253 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 GBP7Q8N8V2 638 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-215ENST00000534307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.93□□□□□ -0.34
SF3B2-215ENST00000534307 CTHRC1Q96CG8 243 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 NTNG2Q96CW9 530 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 CCDC126Q96EE4 140 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 KCNA7Q96RP8 456 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 OR10A5Q9H207 317 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF703Q9H7S9 590 aaPredicted RBP12.93□□□□□ -0.34
SF3B2-215ENST00000534307 ANKZF1Q9H8Y5 726 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 CHST11Q9NPF2 352 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 SIRT5Q9NXA8 310 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 MAT2BQ9NZL9 334 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 CNIH4Q9P003 139 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 HEY2Q9UBP5 337 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 DTX4Q9Y2E6 619 aa12.93□□□□□ -0.34
SF3B2-215ENST00000534307 ANKRD33BA6NCL7 494 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 OR14I1A6ND48 311 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 GOLGA6L10A6NI86 522 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 RFPL3SP0C7P2 107 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 CSNK2A2P19784 350 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 NT5EP21589 574 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 GPX3P22352 226 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 HMOX2P30519 316 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 CRHR1P34998 444 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 FEN1P39748 380 aaKnown RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 SLCO1A2P46721 670 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 FOXA1P55317 472 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 DNAJB13P59910 316 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 RPS6KA2Q15349 733 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 PRAMEF20Q5VT98 475 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 PAOXQ6QHF9 649 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 FAM111BQ6SJ93 734 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 TMEM64Q6YI46 380 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 FRMD7Q6ZUT3 714 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 TRILQ7L0X0 811 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 TAGAPQ8N103 731 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 EID3Q8N140 333 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 LRRC25Q8N386 305 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 RPRMLQ8N4K4 120 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 ACBD4Q8NC06 268 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 SIMC1Q8NDZ2 872 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 EPS8L3Q8TE67 593 aaKnown RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 PHF3Q92576 2039 aaKnown RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 APIPQ96GX9 242 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms