RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 AGAP11Q8TF27 550 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 FAIM2Q9BWQ8 316 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 TSPAN10Q9H1Z9 355 aaPredicted RBP15.41■□□□□ 0.06
PKP3-209ENST00000533069 CXorf21Q9HAI6 301 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 PFDN4Q9NQP4 134 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 MCM8Q9UJA3 840 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 HAO1Q9UJM8 370 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 PSME2Q9UL46 239 aa15.41■□□□□ 0.06
PKP3-209ENST00000533069 A1L4Q6 167 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 SERTM1A2A2V5 107 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 WASHC1A8K0Z3 465 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 EDF1O60869 148 aaKnown RBP15.4■□□□□ 0.06
PKP3-209ENST00000533069 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
PKP3-209ENST00000533069 CPMP14384 443 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 XKP51811 444 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 GPR85P60893 370 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 OCRLQ01968 901 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 SPIN4Q56A73 249 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 RNFT1Q5M7Z0 435 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 Q6ZPB1 254 aaPredicted RBP15.4■□□□□ 0.06
PKP3-209ENST00000533069 CHTF18Q8WVB6 975 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 ZNF317Q96PQ6 595 aaPredicted RBP15.4■□□□□ 0.06
PKP3-209ENST00000533069 GAL3ST4Q96RP7 486 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 ACPTQ9BZG2 426 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 WWTR1Q9GZV5 400 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 MID1IP1Q9NPA3 183 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 CES1P1Q9UKY3 287 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 ZNF835Q9Y2P0 537 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 RAP2CQ9Y3L5 183 aa15.4■□□□□ 0.06
PKP3-209ENST00000533069 HIVEP3Q5T1R4 2406 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 TROVE2P10155 538 aaKnown RBP eCLIP15.39■□□□□ 0.055e-10■■■□□ 18
PKP3-209ENST00000533069 PORP16435 677 aaPredicted RBP15.39■□□□□ 0.05
PKP3-209ENST00000533069 FUT7Q11130 342 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 EBPQ15125 230 aaKnown RBP15.39■□□□□ 0.05
PKP3-209ENST00000533069 GK5Q6ZS86 529 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 ZCCHC23Q6ZST2 131 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 SPPL2CQ8IUH8 684 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 WDR75Q8IWA0 830 aaKnown RBP15.39■□□□□ 0.05
PKP3-209ENST00000533069 UCN3Q969E3 161 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 TM4SF18Q96CE8 201 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 CCT7Q99832 543 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 FAM173AQ9BQD7 235 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 SACM1LQ9NTJ5 587 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 DEPPQ9NTK1 212 aa15.39■□□□□ 0.05
PKP3-209ENST00000533069 A0A1W2PS29 197 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 ACOT7O00154 380 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 CCL21O00585 134 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 PCDH7O60245 1069 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 ZNF354AO60765 605 aaPredicted RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 ZG16O60844 167 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 WISP2O76076 250 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 NADKO95544 446 aaPredicted RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 CLDN1O95832 211 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 CLPSP04118 112 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 P04436 131 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 ATP1B1P05026 303 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 FGF4P08620 206 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 ABOP16442 354 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 CSNK2A2P19784 350 aaPredicted RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 CNR1P21554 472 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 NT5EP21589 574 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 GSTM5P46439 218 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 HTR6P50406 440 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 ACSM2AQ08AH3 577 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 ZNF791Q3KP31 576 aaPredicted RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 ARL13AQ5H913 290 aaPredicted RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 ACSM2BQ68CK6 577 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 GALNT18Q6P9A2 607 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 RPTNQ6XPR3 784 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 TAGAPQ8N103 731 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 OR2M7Q8NG81 312 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 OR7G1Q8NGA0 311 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 PIWIL2Q8TC59 973 aaKnown RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 STON2Q8WXE9 905 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 TP53INP1Q96A56 240 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 KLHL29Q96CT2 875 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 SPACA9Q96E40 222 aaPredicted RBP15.38■□□□□ 0.05
PKP3-209ENST00000533069 KCNA7Q96RP8 456 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 SIRT5Q9NXA8 310 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 TIMM22Q9Y584 194 aa15.38■□□□□ 0.05
PKP3-209ENST00000533069 C2orf92A0A1B0GVN3 265 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 GNG14A0A1W2PPG7 69 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 UBFD1O14562 309 aaKnown RBP15.37■□□□□ 0.05
PKP3-209ENST00000533069 HS6ST1O60243 411 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 CRCPO75575 148 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 ERAL1O75616 437 aaKnown RBP15.37■□□□□ 0.05
PKP3-209ENST00000533069 CHEK2O96017 543 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 FBXO45P0C2W1 286 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 DRD2P14416 443 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 SERPINB3P29508 390 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 SSTR4P31391 388 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 TIA1P31483 386 aaKnown RBP eCLIP15.37■□□□□ 0.05
PKP3-209ENST00000533069 RFC3P40938 356 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 RPL14P50914 215 aaKnown RBP15.37■□□□□ 0.05
PKP3-209ENST00000533069 HMGCS1Q01581 520 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 PLGLB1Q02325 96 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 C3AR1Q16581 482 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 ZNF750Q32MQ0 723 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 CMPK2Q5EBM0 449 aa15.37■□□□□ 0.05
PKP3-209ENST00000533069 HLA-DQA1Q5Y7H0 255 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms