RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 C6orf163Q5TEZ5 329 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 TMEM64Q6YI46 380 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 MILR1Q7Z6M3 343 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 ULK2Q8IYT8 1036 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 METTL4Q8N3J2 472 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 LIX1Q8N485 282 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 MMGT1Q8N4V1 131 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 MYRIPQ8NFW9 859 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 SPPL2AQ8TCT8 520 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 ADIPOR1Q96A54 375 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 SECISBP2Q96T21 854 aaKnown RBP15.44■□□□□ 0.06
CPSF1-207ENST00000531727 MRPL57Q9BQC6 102 aaKnown RBP15.44■□□□□ 0.06
CPSF1-207ENST00000531727 MRPL46Q9H2W6 279 aaKnown RBP15.44■□□□□ 0.06
CPSF1-207ENST00000531727 ELOVL6Q9H5J4 265 aa15.44■□□□□ 0.06
CPSF1-207ENST00000531727 DMGDHQ9UI17 866 aaKnown RBP15.44■□□□□ 0.06
CPSF1-207ENST00000531727 A0A1B0GTL3 188 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 POC1B-GALNT4F8VUJ3 575 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 GUCY1B2O75343 617 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 CPMP14384 443 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 PORP16435 677 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-207ENST00000531727 NT5EP21589 574 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 MAPK12P53778 367 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 NRG3P56975 720 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 SGO1Q5FBB7 561 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 CES4AQ5XG92 561 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 BICRALQ6AI39 1079 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 COMMD6Q7Z4G1 85 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 C17orf47Q8NEP4 570 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 OR7G1Q8NGA0 311 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 TRPC4APQ8TEL6 797 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 ZNF483Q8TF39 744 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-207ENST00000531727 DCAKDQ8WVC6 231 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 IFT81Q8WYA0 676 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 C16orf45Q96MC5 204 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-207ENST00000531727 RILPQ96NA2 401 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 ANGPTL4Q9BY76 406 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 ZNF180Q9UJW8 692 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 CES1P1Q9UKY3 287 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 SLC12A4Q9UP95 1085 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 EXPH5Q8NEV8 1989 aa15.43■□□□□ 0.06
CPSF1-207ENST00000531727 C1orf226A1L170 272 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 A8MT66 165 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 TRIM49D1C9J1S8 452 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 SNX4O95219 450 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 OTCP00480 354 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 S1PR1P21453 382 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 ECHS1P30084 290 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 DLX5P56178 289 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 RPP38P78345 283 aaKnown RBP15.42■□□□□ 0.06
CPSF1-207ENST00000531727 DUSP8Q13202 625 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 SLC48A1Q6P1K1 146 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 LETMD1Q6P1Q0 360 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 SPNS3Q6ZMD2 512 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 RPS27LQ71UM5 84 aaKnown RBP15.42■□□□□ 0.06
CPSF1-207ENST00000531727 PRR22Q8IZ63 422 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 VWA5B2Q8N398 1253 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 NOA1Q8NC60 698 aaKnown RBP15.42■□□□□ 0.06
CPSF1-207ENST00000531727 C1QTNF3Q9BXJ4 246 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 UBQLN3Q9H347 655 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 BRF2Q9HAW0 419 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 FARSBQ9NSD9 589 aaKnown RBP15.42■□□□□ 0.06
CPSF1-207ENST00000531727 SNX6Q9UNH7 406 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 PCDHA9Q9Y5H5 950 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 POLQO75417 2590 aa15.42■□□□□ 0.06
CPSF1-207ENST00000531727 INTS1Q8N201 2190 aaKnown RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 NINQ8N4C6 2090 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 A0A087WUV0 522 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 C15orf38-AP3S2A0A0A6YYH1 394 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 GOLGA6L10A6NI86 522 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 HSPB2A8KAH6 182 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 PPP6CO00743 305 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 PDYNP01213 254 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 ATP1B1P05026 303 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 HPNP05981 417 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 SBK3P0C264 359 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 GPX3P22352 226 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 CASP3P42574 277 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 CDH13P55290 713 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 CRYZQ08257 329 aaKnown RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 GALNT1Q10472 559 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 MAP4K2Q12851 820 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 MYBPHQ13203 477 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 HSPB2Q16082 182 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 PRICKLE4Q2TBC4 344 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 FNDC7Q5VTL7 733 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 SEM1Q6ZVN7 128 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 WDR53Q7Z5U6 358 aaPredicted RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 PACS2Q86VP3 889 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 TMEM151AQ8N4L1 468 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 SELENOMQ8WWX9 145 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 NXF5Q9H1B4 397 aaKnown RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 TRPS1Q9UHF7 1281 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 C15orf41Q9Y2V0 281 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 L3MBTL1Q9Y468 752 aa15.41■□□□□ 0.06
CPSF1-207ENST00000531727 ANKRD17O75179 2603 aaKnown RBP15.41■□□□□ 0.06
CPSF1-207ENST00000531727 AHRRA9YTQ3 701 aa15.4■□□□□ 0.06
CPSF1-207ENST00000531727 TRAPPC6AO75865 159 aa15.4■□□□□ 0.06
CPSF1-207ENST00000531727 ABCB1P08183 1280 aaPredicted RBP15.4■□□□□ 0.06
CPSF1-207ENST00000531727 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
CPSF1-207ENST00000531727 NAGAP17050 411 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms