RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 IRAK1BP1Q5VVH5 260 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 B3GNTL1Q67FW5 361 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-206ENST00000531480 HSDL2Q6YN16 418 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 C9orf40Q8IXQ3 194 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 CCDC116Q8IYX3 515 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 VWA5B2Q8N398 1253 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 SLC5A8Q8N695 610 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 KRTCAP2Q8N6L1 136 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 SIRT6Q8N6T7 355 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 OR8J2Q8NGG1 315 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 PSMA8Q8TAA3 256 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 HAS2Q92819 552 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 GFM2Q969S9 779 aaKnown RBP13.44□□□□□ -0.26
CPSF1-206ENST00000531480 ZNF354BQ96LW1 612 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 EBF4Q9BQW3 602 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 FAM107BQ9H098 131 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 GLIPR2Q9H4G4 154 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 TRIM45Q9H8W5 580 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-206ENST00000531480 ZBTB20Q9HC78 741 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-206ENST00000531480 SDR39U1Q9NRG7 319 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-206ENST00000531480 GIMAP4Q9NUV9 329 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPSF1-206ENST00000531480 PTGFRNQ9P2B2 879 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 COPS7AQ9UBW8 275 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 TEKT2Q9UIF3 430 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 ERVK-19Q9WJR5 959 aa13.44□□□□□ -0.26
CPSF1-206ENST00000531480 A0A087WV62 115 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 TRBV11-1A0A0K0K1C0 115 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 PDPK1O15530 556 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 MAN1A2O60476 641 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 DIAPH2O60879 1101 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 SCN2BO60939 215 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 ZFAND5O76080 213 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 PSMG1O95456 288 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 CBX7O95931 251 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 LAMP1P11279 417 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 IDO1P14902 403 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 NTSP30990 170 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 TRHRP34981 398 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 AQP5P55064 265 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 DUSP8Q13202 625 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 EBPQ15125 230 aaKnown RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 LTB4RQ15722 352 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 GSTA3Q16772 222 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 MEP1AQ16819 746 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 DPY19L1Q2PZI1 675 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 PDCD4Q53EL6 469 aaKnown RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 CGB2Q6NT52 195 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 FAM111BQ6SJ93 734 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 ASB18Q6ZVZ8 466 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 RPS19BP1Q86WX3 136 aaKnown RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 ZNF441Q8N8Z8 693 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 CCDC197Q8NCU1 140 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 C17orf47Q8NEP4 570 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 OR7A2PQ8NGA2 310 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 OR9A2Q8NGT5 310 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 ZBED6CLQ96FA7 236 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 DEFB126Q9BYW3 111 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 BHLHE41Q9C0J9 482 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-206ENST00000531480 CLMPQ9H6B4 373 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 TCF7L2Q9NQB0 619 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 NTMQ9P121 344 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 MYOTQ9UBF9 498 aa13.43□□□□□ -0.26
CPSF1-206ENST00000531480 SPENQ96T58 3664 aaKnown RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 SPTA1P02549 2419 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 EBAG9O00559 213 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 BCAS2O75934 225 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 NT5EP21589 574 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 SSTR4P31391 388 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ZFP36L2P47974 494 aaKnown RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 EMDP50402 254 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 NCBP2P52298 156 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 SEC24CP53992 1094 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 CLNS1AP54105 237 aaKnown RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 WNT3P56703 355 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 TRMT12Q53H54 448 aaKnown RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 CPTPQ5TA50 214 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 TMEM198Q66K66 360 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ANKRD26P1Q6NSI1 321 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 RNF111Q6ZNA4 994 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ACAD11Q709F0 780 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 SPATA21Q7Z572 469 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 OR2L13Q8N349 312 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 RBMXL3Q8N7X1 1067 aaKnown RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ADCY4Q8NFM4 1077 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 OR5L2Q8NGL0 311 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 NUDT8Q8WV74 236 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 TM9SF4Q92544 642 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ADIPOR1Q96A54 375 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 CIDECQ96AQ7 238 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 TEX37Q96LM6 180 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 BBS4Q96RK4 519 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 PRPF18Q99633 342 aaKnown RBP13.42□□□□□ -0.26
CPSF1-206ENST00000531480 CNPPD1Q9BV87 410 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 DPY30Q9C005 99 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 OR10A5Q9H207 317 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
CPSF1-206ENST00000531480 FGFR1OP2Q9NVK5 253 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms