RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 MPP1Q00013 466 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 SORDQ00796 357 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 FOXO1Q12778 655 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 TMED2Q15363 201 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 HSPB2Q16082 182 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 NDUFA9Q16795 377 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 BEAN1Q3B7T3 259 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 LSM12Q3MHD2 195 aaKnown RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ACSF3Q4G176 576 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 WLSQ5T9L3 541 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ITPRIPL1Q6GPH6 555 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ALKBH5Q6P6C2 394 aaKnown RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 CRIP3Q6Q6R5 217 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 KIAA0408Q6ZU52 694 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ZNF534Q76KX8 674 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 RHOUQ7L0Q8 258 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 LDB1Q86U70 411 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 SLC22A16Q86VW1 577 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 RAB42Q8N4Z0 105 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 TMEM156Q8N614 296 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 OR13J1Q8NGT2 312 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 SMPDL3BQ92485 455 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 FAM118BQ9BPY3 351 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 C19orf24Q9BVV8 132 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 VPS11Q9H270 941 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 LIN28AQ9H9Z2 209 aaKnown RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 UBTD1Q9HAC8 227 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ARNT2Q9HBZ2 717 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 SEMA4BQ9NPR2 832 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ABCF3Q9NUQ8 709 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 RLIMQ9NVW2 624 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 C6orf203Q9P0P8 240 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 UVRAGQ9P2Y5 699 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 MTRF1LQ9UGC7 380 aaKnown RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 SLC2A6Q9UGQ3 507 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 FEZ2Q9UHY8 353 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ZDHHC8Q9ULC8 765 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 ERVK-11Q9UQG0 969 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 SH2B3Q9UQQ2 575 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 NAALAD2Q9Y3Q0 740 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 USF3Q68DE3 2245 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 HEATR5AQ86XA9 2040 aa5.8□□□□□ -1.48
VPS13B-211ENST00000522802 MGAM2Q2M2H8 2515 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 hCG_1818297A0A087WSY0 165 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 A0A087X1B8 175 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 IGKV3D-11A0A0A0MRZ8 115 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 A8MUA0 341 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 A8MVJ9 347 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 VSTM5A8MXK1 200 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 TXNDC9O14530 226 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 B4GALT2O60909 372 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 OR2J2O76002 312 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 MATN4O95460 622 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 FHP07954 510 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 PKMP14618 531 aaKnown RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 GABRA1P14867 456 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 PSMA3P25788 255 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 PPP2R1BP30154 601 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 CEACAM8P31997 349 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 COILP38432 576 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 SOX3P41225 446 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 MARCKSL1P49006 195 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 DNASE1L1P49184 302 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 SSR4P51571 173 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 RUNX1T1Q06455 604 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 TRIM14Q14142 442 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 GBX1Q14549 363 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 XKR6Q5GH73 641 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 ANKRD20A2Q5SQ80 823 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 NDUFAF5Q5TEU4 345 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 ANKRD20A1Q5TYW2 823 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 ANKRD20A3Q5VUR7 823 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 HEPHL1Q6MZM0 1159 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 TTC23LQ6PF05 361 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 BZW1Q7L1Q6 419 aaKnown RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 HIPK1Q86Z02 1210 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 WDR75Q8IWA0 830 aaKnown RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 TMEM132CQ8N3T6 1108 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 PLPP5Q8NEB5 264 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 STYXQ8WUJ0 223 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 SMPDL3AQ92484 453 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 SYN2Q92777 582 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 PIGTQ969N2 578 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 SARAFQ96BY9 339 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 FAM136AQ96C01 138 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 LRRC46Q96FV0 321 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 OR1F2PQ96R84 312 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 WDR83Q9BRX9 315 aaKnown RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 DEFB126Q9BYW3 111 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 EXO5Q9H790 373 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 GPR35Q9HC97 309 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 ANKHQ9HCJ1 492 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 NECTIN3Q9NQS3 549 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 HPF1Q9NWY4 346 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 MARCH4Q9P2E8 410 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 FBXW2Q9UKT8 454 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 AAR2Q9Y312 384 aaKnown RBP5.79□□□□□ -1.48
VPS13B-211ENST00000522802 ROS1P08922 2347 aa5.79□□□□□ -1.48
VPS13B-211ENST00000522802 FREM3P0C091 2139 aa5.78□□□□□ -1.48
VPS13B-211ENST00000522802 PKD1L1Q8TDX9 2849 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms