RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 IL26Q9NPH9 171 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 SEMA4BQ9NPR2 832 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ZNF701Q9NV72 531 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 ZNF225Q9UK10 706 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 NXT1Q9UKK6 140 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PCTPQ9UKL6 214 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 TMCO1Q9UM00 188 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 PRPF19Q9UMS4 504 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 DNAJC15Q9Y5T4 150 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 RYR1P21817 5038 aa6.77□□□□□ -1.33
CTNNA1-227ENST00000521387 RAI1Q7Z5J4 1906 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SCN2AQ99250 2005 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 LOC102723996A0A087X1L8 192 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SYCE1LA8MT33 242 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 E5RI56 91 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 NPIPA2E9PIF3 369 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 NPIPA3F8WFD2 350 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 H3BNX3 289 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 NME2P1O60361 137 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 POP7O75817 140 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 LINC00032P0C843 101 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ITGALP20701 1170 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ATP6V1C1P21283 382 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 NME2P22392 152 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ACRV1P26436 265 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 MSX2P35548 267 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ASCL1P50553 236 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 PSME3P61289 254 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 AP2B1P63010 937 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 MS4A2Q01362 244 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 MAPKAPK3Q16644 382 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 REP15Q6BDI9 236 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ARHGAP11AQ6P4F7 1023 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SCIMPQ6UWF3 145 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 UNC5DQ6UXZ4 953 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SNX20Q7Z614 316 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 RAVER1Q8IY67 606 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 KIRREL3Q8IZU9 778 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 LIX1Q8N485 282 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 NAXEQ8NCW5 288 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 HIPK4Q8NE63 616 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 OR9I1Q8NGQ6 314 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 C16orf52Q8NHV5 167 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 FLVCR1-AS1Q8TAF5 88 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SLC22A8Q8TCC7 542 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SLC26A7Q8TE54 656 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 KCNJ9Q92806 393 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 GLYATL1Q969I3 302 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 CCDC124Q96CT7 223 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 RSRC1Q96IZ7 334 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 LYSMD1Q96S90 227 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 SERPINI1Q99574 410 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 C19orf43Q9BQ61 176 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 UTP23Q9BRU9 249 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 HGH1Q9BTY7 390 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ZCCHC2Q9C0B9 1178 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 ZNF700Q9H0M5 742 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 RIC8BQ9NVN3 520 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 TMEM160Q9NX00 188 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 UTP6Q9NYH9 597 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 NUDT4Q9NZJ9 180 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 CD274Q9NZQ7 290 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 TIMM22Q9Y584 194 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 MAU2Q9Y6X3 613 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 KIAA1549Q9HCM3 1950 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 HEATR5AQ86XA9 2040 aa6.76□□□□□ -1.33
CTNNA1-227ENST00000521387 IGLV3-12A0A075B6K2 115 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 GLYATL1P3A0A0U1RQE8 302 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 E7ENX8 843 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 MRASO14807 208 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 TFECO14948 347 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 DSCR3O14972 297 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 TAPBPO15533 448 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 PRMT3O60678 531 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 SNRNP200O75643 2136 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 OR4F21O95013 312 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 ACADSP16219 412 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 LBPP18428 481 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 ME2P23368 584 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 COMPP49747 757 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 NME5P56597 212 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 LCP2Q13094 533 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 STX5Q13190 355 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 MAPRE2Q15555 327 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 CLEC12BQ2HXU8 276 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 MUM1Q2TAK8 710 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 RIPPLY2Q5TAB7 128 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 LPCAT4Q643R3 524 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 C8orf82Q6P1X6 216 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 ZNF585AQ6P3V2 769 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 SBSNQ6UWP8 590 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 DDIASQ8IXT1 998 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 ADGRF3Q8IZF5 1079 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 CLDN19Q8N6F1 224 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 RNF148Q8N7C7 305 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 FAM98AQ8NCA5 519 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 RNF217Q8TC41 542 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 JADE3Q92613 823 aa6.75□□□□□ -1.33
CTNNA1-227ENST00000521387 N4BP2L2Q92802 583 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms