RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SOX18P35713 384 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 PPP2R2AP63151 447 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 MAD2L1Q13257 205 aaPredicted RBP20.37■□□□□ 0.85
VEGFA-217ENST00000518538 ZNF628Q5EBL2 1059 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 PIGGQ5H8A4 983 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 ZNF227Q86WZ6 799 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 FAM9CQ8IZT9 166 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 LIX1Q8N485 282 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 OR9A2Q8NGT5 310 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 CLHC1Q8NHS4 586 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 ASB15Q8WXK1 588 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 ZNF75CPQ92670 426 aaPredicted RBP20.37■□□□□ 0.85
VEGFA-217ENST00000518538 MIB2Q96AX9 1013 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 ERP27Q96DN0 273 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 SCMH1Q96GD3 660 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 PPP1R36Q96LQ0 422 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 C5orf34Q96MH7 638 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 C1orf50Q9BV19 199 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 REEP4Q9H6H4 257 aa20.37■□□□□ 0.85
VEGFA-217ENST00000518538 RYDENQ9NUL5 291 aaKnown RBP20.37■□□□□ 0.85
VEGFA-217ENST00000518538 COPG1Q9Y678 874 aaKnown RBP20.37■□□□□ 0.85
VEGFA-217ENST00000518538 A8MVJ9 347 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 AKAP10O43572 662 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 SLC25A12O75746 678 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 LRATO95237 230 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 PRPS2P11908 318 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 NTSP30990 170 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 SOX3P41225 446 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 FOXK1P85037 733 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 EMX2Q04743 252 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 PDE7AQ13946 482 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 IL23RQ5VWK5 629 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 CYP4Z2PQ8N1L4 340 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 TMEM178AQ8NBL3 297 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 SLC22A8Q8TCC7 542 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 PPCDCQ96CD2 204 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 GAL3ST4Q96RP7 486 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 NUF2Q9BZD4 464 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 AKTIPQ9H8T0 292 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 MEAF6Q9HAF1 191 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 ASF1BQ9NVP2 202 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 HPF1Q9NWY4 346 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 MAP10Q9P2G4 905 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 EIF3LQ9Y262 564 aaKnown RBP20.36■□□□□ 0.85
VEGFA-217ENST00000518538 CFL2Q9Y281 166 aa20.36■□□□□ 0.85
VEGFA-217ENST00000518538 CNTRLQ7Z7A1 2325 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 C2orf92A0A1B0GVN3 265 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 VPS4BO75351 444 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 OR6B1O95007 311 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 CBX7O95931 251 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 SP1P08047 785 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 PCSK2P16519 638 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 NCBP2P52298 156 aaKnown RBP eCLIP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 MRPS35P82673 323 aaKnown RBP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 EXOSC7Q15024 291 aaKnown RBP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 TRMT12Q53H54 448 aaKnown RBP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 SLC25A25Q6KCM7 469 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 OPN5Q6U736 354 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 R3HCC1LQ7Z5L2 792 aaKnown RBP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 LRRC34Q8IZ02 419 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 SLC15A4Q8N697 577 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 ZNF441Q8N8Z8 693 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 C16orf52Q8NHV5 167 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 TMEM125Q96AQ2 219 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 MTERF3Q96E29 417 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 BARD1Q99728 777 aaKnown RBP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 HES7Q9BYE0 225 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 KLHL1Q9NR64 748 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 ASIC5Q9NY37 505 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 NOP53Q9NZM5 478 aaKnown RBP20.35■□□□□ 0.85
VEGFA-217ENST00000518538 BCAP29Q9UHQ4 241 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 ERVK-11Q9UQG0 969 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 NTNG1Q9Y2I2 539 aa20.35■□□□□ 0.85
VEGFA-217ENST00000518538 SLCO1B7G3V0H7 640 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 HDAC3O15379 428 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 NME2P1O60361 137 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 ZNF354AO60765 605 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-217ENST00000518538 BCAS2O75934 225 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-217ENST00000518538 SLITRK5O94991 958 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 RASAL1O95294 804 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 NADKO95544 446 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-217ENST00000518538 DDX5P17844 614 aaKnown RBP20.34■□□□□ 0.85
VEGFA-217ENST00000518538 NME2P22392 152 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 HPCAL1P37235 193 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 RPL3P39023 403 aaKnown RBP20.34■□□□□ 0.85
VEGFA-217ENST00000518538 DUSP8Q13202 625 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 IGFBP7Q16270 282 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 HLA-DQA1Q5Y7H0 255 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 ANKRD26P1Q6NSI1 321 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 FAM180AQ6UWF9 173 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 C17orf47Q8NEP4 570 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 OR52R1Q8NGF1 315 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 GRHL3Q8TE85 626 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 KAT2AQ92830 837 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 ADIPOR1Q96A54 375 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 TP53INP1Q96A56 240 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 GLIPR2Q9H4G4 154 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 AGPAT4Q9NRZ5 378 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 SH3BP4Q9P0V3 963 aa20.34■□□□□ 0.85
VEGFA-217ENST00000518538 MARCOQ9UEW3 520 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms