RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 ASCL3Q9NQ33 180 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LHX9Q9NQ69 397 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 THSD1Q9NS62 852 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FGF21Q9NSA1 209 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CUTCQ9NTM9 273 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C14orf105Q9NVL8 296 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TMEM45AQ9NWC5 275 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NMRK1Q9NWW6 199 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MS4A12Q9NXJ0 267 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ASIC5Q9NY37 505 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 EHD3Q9NZN3 535 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CIDEBQ9UHD4 219 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZDHHC2Q9UIJ5 367 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SERTAD3Q9UJW9 196 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NXT1Q9UKK6 140 aaKnown RBP2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZNF490Q9ULM2 529 aaPredicted RBP2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CDC14AQ9UNH5 594 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SH2B3Q9UQQ2 575 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CCL27Q9Y4X3 112 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DNAJC15Q9Y5T4 150 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KNTC1P50748 2209 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ASPMQ8IZT6 3477 aa2.07□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TDRD6O60522 2096 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LOC105369274A0A096LPK9 316 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LOC102723532A0A0G2JNH3 316 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 A0A0J9YVX5 310 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GOLGA8QA0A0J9YX86 632 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 A0A1W2PPL8 197 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HYKKA2RU49 373 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GOLGA8OA6NCC3 632 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LRIT2A6NDA9 550 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 VSTM2BA6NLU5 285 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 A8MU76 341 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MAGEB17A8MXT2 336 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 B5MCH6 92 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C4orf51C9J302 202 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C9J4A7 227 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GOLGA8NF8WBI6 632 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 H3BML4 177 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLC28A1O00337 649 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MANBAO00462 879 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PPP6CO00743 305 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PLPP1O14494 284 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SDHDO14521 159 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZNF195O14628 629 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PIP5K1BO14986 540 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LSM1O15116 133 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CASC3O15234 703 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLC22A2O15244 555 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GPR42O15529 346 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZNF749O43361 778 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ERI3O43414 337 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HCRTR1O43613 425 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ITM2AO43736 263 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 OR1F1O43749 312 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LCMT2O60294 686 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RAD1O60671 282 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GALR3O60755 368 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GUCY1B2O75343 617 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CRCPO75575 148 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LYPLA1O75608 230 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TUSC2O75896 110 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 STK17BO94768 372 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ETHE1O95571 254 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PLATP00750 562 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PDYNP01213 254 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KLK3P07288 261 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 INHBBP09529 407 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RAB40ALP0C0E4 278 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TROVE2P10155 538 aaKnown RBP eCLIP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KITP10721 976 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PIM1P11309 404 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PRPS2P11908 318 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CCL4P13236 92 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RNH1P13489 461 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DDX5P17844 614 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TSPAN8P19075 237 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ITIH1P19827 911 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ITGAXP20702 1163 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MALP21145 153 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HIST1H1TP22492 207 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 JAK1P23458 1154 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RBMS1P29558 406 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PPP2R1BP30154 601 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TIA1P31483 386 aaKnown RBP eCLIP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HNRNPH1P31943 449 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GALNSP34059 522 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 BSGP35613 385 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GNALP38405 381 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RPL3P39023 403 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ARL1P40616 181 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ETV5P41161 510 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 BUD31P41223 144 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SSR2P43308 183 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ASMTP46597 345 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 AVPR1BP47901 424 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PPM1FP49593 454 aaPredicted RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RPL14P50914 215 aaKnown RBP2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ATP4BP51164 291 aa2.06□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RAP1GDS1P52306 607 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms