RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ANKRD26P1Q6NSI1 321 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 FAM111BQ6SJ93 734 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 IGFL2Q6UWQ7 119 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ISLR2Q6UXK2 745 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 HSDL2Q6YN16 418 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 HPS6Q86YV9 775 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 LGI4Q8N135 537 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 VWA5B2Q8N398 1253 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 SIRT6Q8N6T7 355 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ADCY4Q8NFM4 1077 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 OR7G1Q8NGA0 311 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 OR7A2PQ8NGA2 310 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 RFWD2Q8NHY2 731 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 C9orf43Q8TAL5 461 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 TESCQ96BS2 214 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ERP27Q96DN0 273 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ZBED6CLQ96FA7 236 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ZNF354BQ96LW1 612 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 AMDHD1Q96NU7 426 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 CNPPD1Q9BV87 410 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 DEFB126Q9BYW3 111 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 GLIPR2Q9H4G4 154 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 SLAMF7Q9NQ25 335 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ATAD3AQ9NVI7 634 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 PTGFRNQ9P2B2 879 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 TEKT2Q9UIF3 430 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ERVK-19Q9WJR5 959 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 ZNF451Q9Y4E5 1061 aa11.07□□□□□ -0.64
PDLIM5-208ENST00000504489 BOD1L1Q8NFC6 3051 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 A0A087WV62 115 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 OR6C76A6NM76 312 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 A8MUI8 341 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 PLOD2O00469 737 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 CDK2AP1O14519 115 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ATXN7O15265 892 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 PLOD3O60568 738 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 LAMP1P11279 417 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 MRPL19P49406 292 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 NCBP2P52298 156 aaKnown RBP eCLIP11.06□□□□□ -0.642e-10■□□□□ 8.4
PDLIM5-208ENST00000504489 CLNS1AP54105 237 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 SLC37A1P57057 533 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 UFM1P61960 85 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 SRSF11Q05519 484 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 MFAP5Q13361 173 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 RAPSNQ13702 412 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 MLC1Q15049 377 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 RPS6KA2Q15349 733 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 LTB4RQ15722 352 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 DPY19L1Q2PZI1 675 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 PDCD4Q53EL6 469 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ABHD17BQ5VST6 288 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 TMEM198Q66K66 360 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 CGB2Q6NT52 195 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 IGFL3Q6UXB1 125 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 RNF111Q6ZNA4 994 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 RPS19BP1Q86WX3 136 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 SLC5A8Q8N695 610 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ZNF321PQ8N8H1 164 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ZNF615Q8N8J6 731 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 OR8J2Q8NGG1 315 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 OR9A2Q8NGT5 310 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ZFP28Q8NHY6 868 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 DOK4Q8TEW6 326 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 CIDECQ96AQ7 238 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 THOC1Q96FV9 657 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 NPAS2Q99743 824 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 BHLHE41Q9C0J9 482 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 CLMPQ9H6B4 373 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 SDR39U1Q9NRG7 319 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 DCTN4Q9UJW0 460 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 PCNX3Q9H6A9 2034 aa11.06□□□□□ -0.64
PDLIM5-208ENST00000504489 ZFYVE26Q68DK2 2539 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 TMEM200CA6NKL6 621 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 E9PBE3 544 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 K7EM74 188 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 PRKNO60260 465 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 BCAS2O75934 225 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 CBX7O95931 251 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 CLPSP04118 112 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 SSTR4P31391 388 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 LSP1P33241 339 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 PTGER1P34995 402 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 GYS2P54840 703 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 MANFP55145 182 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 MLF1P58340 268 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 RNF4P78317 190 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 MEP1AQ16819 746 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 PGS1Q32NB8 556 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 TRMT12Q53H54 448 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 LACTB2Q53H82 288 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 FHL5Q5TD97 284 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 METTL21CQ5VZV1 264 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 B3GNTL1Q67FW5 361 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 FCRLBQ6BAA4 426 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 ZNF551Q7Z340 670 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 GLB1L3Q8NCI6 653 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 OR5L2Q8NGL0 311 aa11.05□□□□□ -0.64
PDLIM5-208ENST00000504489 NUBPLQ8TB37 319 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms