RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PRKD3O94806 890 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MLYCDO95822 493 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SNAI1O95863 264 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TGM6O95932 706 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TRBC1P01850 177 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CSN2P05814 226 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 FGF2P09038 288 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR4E1P0C645 316 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 LPOP22079 712 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PSMA1P25786 263 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 KLRC2P26717 231 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MST1P26927 711 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PBX3P40426 434 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ETV6P41212 452 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GDF5P43026 501 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 KIR3DL1P43629 444 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MS4A2Q01362 244 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 RBBP4Q09028 425 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 RAET1GQ6H3X3 334 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TNFAIP8L2Q6P589 184 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SYCE2Q6PIF2 218 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NXPE4Q6UWF7 544 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ALKAL1Q6UXT8 129 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TMPRSS11AQ6ZMR5 421 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 DNAJB7Q7Z6W7 309 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ADGRD2Q7Z7M1 963 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GID4Q8IVV7 300 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR8H3Q8N146 312 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CCDC54Q8NEL0 328 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ATP6V1C2Q8NEY4 427 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR13C4Q8NGS5 318 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 EEF1AKMT1Q8WVE0 214 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NT5C3BQ969T7 300 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ASB16Q96NS5 453 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 EGLN1Q9GZT9 426 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 FBXO44Q9H4M3 255 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 IGFLR1Q9H665 355 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SIX2Q9NPC8 291 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PCDHB16Q9NRJ7 776 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TVP23BQ9NYZ1 205 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TREM2Q9NZC2 230 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OSGIN1Q9UJX0 560 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NOCTQ9UK39 431 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 IKZF2Q9UKS7 526 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NDRG2Q9UN36 371 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SNX6Q9UNH7 406 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ING4Q9UNL4 249 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UBIAD1Q9Y5Z9 338 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZFC3H1O60293 1989 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MROH6A6NGR9 719 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR6C70A6NIJ9 312 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TNFRSF11BO00300 401 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PLD2O14939 933 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NARSO43776 548 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GATBO75879 557 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 STBD1O95210 358 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CH25HO95992 272 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 C4BPAP04003 597 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GBAP04062 536 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GAAP10253 952 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SAGP10523 405 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CCL5P13501 91 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PKMP14618 531 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PRKCHP24723 683 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ITPKBP27987 946 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GTF2E2P29084 291 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CDKN1BP46527 198 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PSMD8P48556 350 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 LIMK2P53671 638 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 EPHB3P54753 998 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GP2P55259 537 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PRMT2P55345 433 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 DLX5P56178 289 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TAF10Q12962 218 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GPR19Q15760 415 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MEP1AQ16819 746 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CLEC12AQ5QGZ9 265 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 C9orf64Q5T6V5 341 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NADSYN1Q6IA69 706 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 RGS7BPQ6MZT1 257 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZC3H14Q6PJT7 736 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CDHR3Q6ZTQ4 885 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UBE2R2Q712K3 238 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM122BQ7Z309 247 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZDHHC21Q8IVQ6 265 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 IGDCC3Q8IVU1 814 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PHC2Q8IXK0 858 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TIGD4Q8IY51 512 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZZZ3Q8IYH5 903 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SYNPOQ8N3V7 929 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CLDN19Q8N6F1 224 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 C12orf76Q8N812 135 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR13C3Q8NGS6 347 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR10G6Q8NH81 332 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SCAMP5Q8TAC9 235 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SNX33Q8WV41 574 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC7A6Q92536 515 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 LENG9Q96B70 501 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CENPNQ96H22 339 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 COPS8Q99627 209 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms