RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SAP18O00422 153 aaKnown RBP2.41□□□□□ -2.02
SMC4-227ENST00000497984 STBD1O95210 358 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 IGHV3-9P01782 118 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 SERPINF2P08697 491 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 P0C879 139 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 TPBGLP0DKB5 382 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 IGFBP5P24593 272 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 ACP1P24666 158 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 PRKAR2BP31323 418 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 ZNF133P52736 654 aaPredicted RBP2.41□□□□□ -2.02
SMC4-227ENST00000497984 NDST1P52848 882 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 STX1BP61266 288 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 GIT2Q14161 759 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 ISXQ2M1V0 245 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 HECTD3Q5T447 861 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 TAF3Q5VWG9 929 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 FAM219BQ5XKK7 198 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 GPR137CQ8N3F9 429 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 OR4L1Q8NH43 312 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 FIBINQ8TAL6 211 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 GLYATL1Q969I3 302 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 FAF2Q96CS3 445 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 CFAP36Q96G28 342 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 EBF4Q9BQW3 602 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 TRIM9Q9C026 710 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 COPS7BQ9H9Q2 264 aaPredicted RBP2.41□□□□□ -2.02
SMC4-227ENST00000497984 SLC25A19Q9HC21 320 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 TIGARQ9NQ88 270 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 FAM212BQ9NTI7 297 aaPredicted RBP2.41□□□□□ -2.02
SMC4-227ENST00000497984 ACOXLQ9NUZ1 547 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 SPG21Q9NZD8 308 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 RPS6KB2Q9UBS0 482 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 MRTO4Q9UKD2 239 aaKnown RBP2.41□□□□□ -2.02
SMC4-227ENST00000497984 AFF2P51816 1311 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 IGKV6-21A0A0C4DH24 114 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 A4D1N5 150 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 YJEFN3A6XGL0 299 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 PANO1I0J062 215 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 PSMD3O43242 534 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 GPAA1O43292 621 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 EZRP15311 586 aaKnown RBP2.4□□□□□ -2.03
SMC4-227ENST00000497984 FCARP24071 287 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 SLC7A2P52569 658 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 MSLNQ13421 630 aaPredicted RBP2.4□□□□□ -2.03
SMC4-227ENST00000497984 ACER2Q5QJU3 275 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 ZCCHC12Q6PEW1 402 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 MFSD7Q6UXD7 560 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 APOOLQ6UXV4 268 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 GOT1L1Q8NHS2 421 aaPredicted RBP2.4□□□□□ -2.03
SMC4-227ENST00000497984 ZNF564Q8TBZ8 553 aaPredicted RBP2.4□□□□□ -2.03
SMC4-227ENST00000497984 RDH11Q8TC12 318 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 UBTD2Q8WUN7 234 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 BIRC7Q96CA5 298 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 FAM122AQ96E09 287 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 EPSTI1Q96J88 318 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 PIWIL1Q96J94 861 aaKnown RBP2.4□□□□□ -2.03
SMC4-227ENST00000497984 C9orf85Q96MD7 179 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 FAM173AQ9BQD7 235 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 HES7Q9BYE0 225 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 SLC26A1Q9H2B4 701 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 TAS2R16Q9NYV7 291 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 EMCNQ9ULC0 261 aa2.4□□□□□ -2.03
SMC4-227ENST00000497984 FOXA2Q9Y261 457 aaPredicted RBP2.4□□□□□ -2.03
SMC4-227ENST00000497984 NPIPA5A0A0B4J1W7 369 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 SH3PXD2BA1X283 911 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 TRABD2BA6NFA1 517 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 EPOPA6NHQ4 379 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 EFCAB7A8K855 629 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 NPIPA5E9PKD4 350 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 DUSP14O95147 198 aaKnown RBP2.39□□□□□ -2.03
SMC4-227ENST00000497984 SFTPBP07988 381 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 NUDT17P0C025 328 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 LAMP1P11279 417 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 VCLP18206 1134 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 HMGCLP35914 325 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 ROR1Q01973 937 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 YWHAHQ04917 246 aaPredicted RBP2.39□□□□□ -2.03
SMC4-227ENST00000497984 ZNF544Q6NX49 715 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 TATDN1Q6P1N9 297 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 SYCP3Q8IZU3 236 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 LINC00518Q8N0U6 118 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 TFB1MQ8WVM0 346 aaKnown RBP2.39□□□□□ -2.03
SMC4-227ENST00000497984 DDX50Q9BQ39 737 aaKnown RBP2.39□□□□□ -2.03
SMC4-227ENST00000497984 NTMT1Q9BV86 223 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 RNF41Q9H4P4 317 aaPredicted RBP2.39□□□□□ -2.03
SMC4-227ENST00000497984 DCTPP1Q9H773 170 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 CNIH4Q9P003 139 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 DIMT1Q9UNQ2 313 aaKnown RBP2.39□□□□□ -2.03
SMC4-227ENST00000497984 MOKQ9UQ07 419 aa2.39□□□□□ -2.03
SMC4-227ENST00000497984 ZNFX1Q9P2E3 1918 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 CACNB4O00305 520 aaPredicted RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 CHEK1O14757 476 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 ARPC1BO15143 372 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 APBB3O95704 486 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 CHRNGP07510 517 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 ZNF853P0CG23 659 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 PVRP15151 417 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 UCP1P25874 307 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 SERPINB6P35237 376 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms