RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 OR5AK3PQ8NH89 298 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 OR14A16Q8NHC5 309 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 SFXN5Q8TD22 340 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 DAZLQ92904 295 aaKnown RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 FGF11Q92914 225 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 SLC7A6OSQ96CW6 309 aaPredicted RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 WDR77Q9BQA1 342 aaPredicted RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 SLC35A5Q9BS91 424 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 NTMQ9P121 344 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 PTGFRNQ9P2B2 879 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 CLCA3PQ9Y6N3 262 aa17.05■□□□□ 0.32
RGP1-202ENST00000496906 NUP214P35658 2090 aaPredicted RBP17.05■□□□□ 0.32
RGP1-202ENST00000496906 NCOR2Q9Y618 2525 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 RNF103-CHMP3A0A140T963 221 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 HRKO00198 91 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 UPK1AO00322 258 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 HNRNPCL1O60812 293 aaKnown RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 ATP5HO75947 161 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 LIFP15018 202 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 S1PR1P21453 382 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 CPOXP36551 454 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 CCT3P49368 545 aaKnown RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 PGDP52209 483 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 MXRA7P84157 204 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 SLC25A3Q00325 362 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 EEF1A2Q05639 463 aaKnown RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 FUT7Q11130 342 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 IL10RAQ13651 578 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 ZNF267Q14586 743 aaPredicted RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 PPP1R32Q7Z5V6 425 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 SIMC1Q8NDZ2 872 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 ZFP90Q8TF47 636 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 MOAP1Q96BY2 351 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 AURKBQ96GD4 344 aaPredicted RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 MAGED4Q96JG8 741 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 GPATCH1Q9BRR8 931 aaKnown RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 C1orf21Q9H246 121 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 ANKRA2Q9H9E1 313 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 ZCCHC3Q9NUD5 404 aaKnown RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 DDX18Q9NVP1 670 aaKnown RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.04■□□□□ 0.32
RGP1-202ENST00000496906 ERVK-19Q9WJR5 959 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 AKAP13Q12802 2813 aa17.04■□□□□ 0.32
RGP1-202ENST00000496906 A0A1W2PQ72 361 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 MED19A0JLT2 244 aaPredicted RBP17.03■□□□□ 0.32
RGP1-202ENST00000496906 SAGE2PA6NJ88 616 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 SOCS6O14544 535 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 EMC8O43402 210 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 DYRK3O43781 588 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 DDAH2O95865 285 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 CBX7O95931 251 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 C1QCP02747 245 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 PRR5P85299 388 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 SPDYE7PQ495Y7 208 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 RUNDC3AQ59EK9 446 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 PAPD4Q6PIY7 484 aaKnown RBP17.03■□□□□ 0.32
RGP1-202ENST00000496906 KIRREL2Q6UWL6 708 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 VASH2Q86V25 355 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 FBXL20Q96IG2 436 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 ANKRD27Q96NW4 1050 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 LPAR4Q99677 370 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 HOPXQ9BPY8 73 aaPredicted RBP17.03■□□□□ 0.32
RGP1-202ENST00000496906 EFHD1Q9BUP0 239 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 CNPPD1Q9BV87 410 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 TMEM121BQ9BXQ6 578 aaPredicted RBP17.03■□□□□ 0.32
RGP1-202ENST00000496906 EPS8L2Q9H6S3 715 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 TPT1P8Q9HAU6 139 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 C3orf14Q9HBI5 128 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 NDE1Q9NXR1 346 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 TAS2R1Q9NYW7 299 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 C19orf53Q9UNZ5 99 aaPredicted RBP17.03■□□□□ 0.32
RGP1-202ENST00000496906 GMEB1Q9Y692 573 aa17.03■□□□□ 0.32
RGP1-202ENST00000496906 FREM2Q5SZK8 3169 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 IGHV1-45A0A0A0MS14 117 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 TLX3O43711 291 aaPredicted RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 CREG1O75629 220 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 PSMG1O95456 288 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 IGKV3-11P04433 115 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 COX6A1P12074 109 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 SLC6A2P23975 617 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 SSTR4P31391 388 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 OTX2P32243 289 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 DUSP8Q13202 625 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 EXOSC7Q15024 291 aaKnown RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 PCOLCEQ15113 449 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 LACTB2Q53H82 288 aaPredicted RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 SAXO2Q658L1 398 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 NANOGP8Q6NSW7 305 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 C16orf89Q6UX73 402 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 SZRD1Q7Z422 152 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 YTHDF3Q7Z739 585 aaKnown RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 PGAM4Q8N0Y7 254 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 NFAM1Q8NET5 270 aaPredicted RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 NUP43Q8NFH3 380 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 OR11G2Q8NGC1 345 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 OR56A1Q8NGH5 318 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 SNIP1Q8TAD8 396 aaKnown RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 SLC2A12Q8TD20 617 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 ADAMTS17Q8TE56 1095 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms