RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PLSCR2Q9NRY7 297 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 OXSMQ9NWU1 459 aa30.61■■■□□ 2.49
CBX4-203ENST00000494546 ATP1B1P05026 303 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 DUSP2Q05923 314 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 PRICKLE4Q2TBC4 344 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 SPDYAQ5MJ70 313 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 ARHGAP11AQ6P4F7 1023 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 CD163Q86VB7 1156 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 TMEM251Q8N6I4 163 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 ZNF441Q8N8Z8 693 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 TP53INP1Q96A56 240 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 CNRIP1Q96F85 164 aaPredicted RBP30.6■■■□□ 2.49
CBX4-203ENST00000494546 EBPLQ9BY08 206 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 SHCBP1LQ9BZQ2 653 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 ZDHHC11Q9H8X9 412 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 UTS2RQ9UKP6 389 aa30.6■■■□□ 2.49
CBX4-203ENST00000494546 SEC23IPQ9Y6Y8 1000 aaKnown RBP30.6■■■□□ 2.49
CBX4-203ENST00000494546 S1PR1P21453 382 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 TIA1P31483 386 aaKnown RBP eCLIP30.59■■■□□ 2.49
CBX4-203ENST00000494546 MAGEA5P43359 124 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 SMSP52788 366 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 KCNJ2P63252 427 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 IFFO1Q0D2I5 559 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 FOXO1Q12778 655 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 ART3Q13508 389 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 ADCY4Q8NFM4 1077 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 RYDENQ9NUL5 291 aaKnown RBP30.59■■■□□ 2.49
CBX4-203ENST00000494546 MAT2BQ9NZL9 334 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 BCAP29Q9UHQ4 241 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 CHCHD2Q9Y6H1 151 aaPredicted RBP30.59■■■□□ 2.49
CBX4-203ENST00000494546 MAST4O15021 2626 aa30.59■■■□□ 2.49
CBX4-203ENST00000494546 EML6Q6ZMW3 1958 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 SERTM1A2A2V5 107 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 H3BQF6 201 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 LRATO95237 230 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 NUDT17P0C025 328 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 MGAT2Q10469 447 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 MAP4K2Q12851 820 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 EXOSC7Q15024 291 aaKnown RBP30.58■■■□□ 2.49
CBX4-203ENST00000494546 NTRK2Q16620 822 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 IMPG1Q17R60 797 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 LRRC25Q8N386 305 aaPredicted RBP30.58■■■□□ 2.49
CBX4-203ENST00000494546 FBXW8Q8N3Y1 598 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 FAM109AQ8N4B1 249 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 C16orf78Q8WTQ4 265 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 ADIPOR1Q96A54 375 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 IQCGQ9H095 443 aaKnown RBP30.58■■■□□ 2.49
CBX4-203ENST00000494546 CNIH4Q9P003 139 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 NOL12Q9UGY1 213 aaKnown RBP eCLIP30.58■■■□□ 2.49
CBX4-203ENST00000494546 MID2Q9UJV3 735 aa30.58■■■□□ 2.49
CBX4-203ENST00000494546 V9GYY5 206 aaPredicted RBP30.58■■■□□ 2.49
CBX4-203ENST00000494546 NAV2Q8IVL1 2488 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 SLU7O95391 586 aaKnown RBP30.57■■■□□ 2.48
CBX4-203ENST00000494546 DRD2P14416 443 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 NRG3P56975 720 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 GTF3C1Q12789 2109 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 LTB4RQ15722 352 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 LIPMQ5VYY2 423 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 XKRXQ6PP77 449 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 C10orf107Q8IVU9 208 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 EID3Q8N140 333 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 RIBC1Q8N443 379 aaPredicted RBP30.57■■■□□ 2.48
CBX4-203ENST00000494546 EXOSC8Q96B26 276 aaKnown RBP30.57■■■□□ 2.48
CBX4-203ENST00000494546 ZNF681Q96N22 645 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 TNFRSF12AQ9NP84 129 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 DTX4Q9Y2E6 619 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 NPFFR2Q9Y5X5 522 aa30.57■■■□□ 2.48
CBX4-203ENST00000494546 ATP6AP2A0A1C7CYW4 349 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 CAPN14A8MX76 684 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 E9PLN8 166 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 ATP6AP2O75787 350 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 ANXA4P09525 319 aaPredicted RBP30.56■■■□□ 2.48
CBX4-203ENST00000494546 GPX3P22352 226 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 HEPACAMQ14CZ8 416 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 SP5Q6BEB4 398 aaPredicted RBP30.56■■■□□ 2.48
CBX4-203ENST00000494546 CDC26Q8NHZ8 85 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 AENQ8WTP8 325 aaKnown RBP30.56■■■□□ 2.48
CBX4-203ENST00000494546 APOPT1Q96IL0 206 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 VKORC1Q9BQB6 163 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 LIPGQ9Y5X9 500 aa30.56■■■□□ 2.48
CBX4-203ENST00000494546 NBPF19A0A087WUL8 3843 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 ADAM10O14672 748 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 FBXW4P57775 412 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 RPS6KA2Q15349 733 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 GALNT18Q6P9A2 607 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 CCDC116Q8IYX3 515 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 PRR22Q8IZ63 422 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 SIMC1Q8NDZ2 872 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 C11orf24Q96F05 449 aaPredicted RBP30.55■■■□□ 2.48
CBX4-203ENST00000494546 JSRP1Q96MG2 331 aaPredicted RBP30.55■■■□□ 2.48
CBX4-203ENST00000494546 ZNF639Q9UID6 485 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 CNOT11Q9UKZ1 510 aaKnown RBP30.55■■■□□ 2.48
CBX4-203ENST00000494546 BOKQ9UMX3 212 aaPredicted RBP30.55■■■□□ 2.48
CBX4-203ENST00000494546 CFL2Q9Y281 166 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 PLLPQ9Y342 182 aa30.55■■■□□ 2.48
CBX4-203ENST00000494546 KLF2Q9Y5W3 355 aaPredicted RBP30.55■■■□□ 2.48
CBX4-203ENST00000494546 TP53I11O14683 189 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 CELA3AP09093 270 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 TMED10P49755 219 aaKnown RBP30.54■■■□□ 2.48
CBX4-203ENST00000494546 MRPS35P82673 323 aaKnown RBP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms