RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 KLF11O14901 512 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 AKAP10O43572 662 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SLC25A12O75746 678 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 LRATO95237 230 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PCSK2P16519 638 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 S1PR1P21453 382 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MPIP34949 423 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PPP2R2AP63151 447 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 FOXK1P85037 733 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 OCRLQ01968 901 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MAD2L1Q13257 205 aaPredicted RBP15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PRSS53Q2L4Q9 553 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MPEG1Q2M385 716 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SMU1Q2TAY7 513 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ZNF628Q5EBL2 1059 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PIGGQ5H8A4 983 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 CYP4Z2PQ8N1L4 340 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 TMEM178AQ8NBL3 297 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 OR9A2Q8NGT5 310 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SLC22A8Q8TCC7 542 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 TMEM125Q96AQ2 219 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 CTHRC1Q96CG8 243 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SCMH1Q96GD3 660 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ZNF764Q96H86 408 aaPredicted RBP15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 HES7Q9BYE0 225 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NUF2Q9BZD4 464 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 REEP4Q9H6H4 257 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 KLHL1Q9NR64 748 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ZNF446Q9NWS9 450 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 HPF1Q9NWY4 346 aa15.08■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MYO1GB0I1T2 1018 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PYCARD-AS1I3L0S3 204 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 TBX19O60806 448 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 OR6B1O95007 311 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 RASAL1O95294 804 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 CBX7O95931 251 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SP1P08047 785 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PRPS2P11908 318 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SOX18P35713 384 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 HPCAL1P37235 193 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SOX3P41225 446 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NCBP2P52298 156 aaKnown RBP eCLIP15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 EMX2Q04743 252 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 EXOSC7Q15024 291 aaKnown RBP15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 IGFBP7Q16270 282 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 IL23RQ5VWK5 629 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 HLA-DQA1Q5Y7H0 255 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SLC25A25Q6KCM7 469 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 FAM180AQ6UWF9 173 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ZNF227Q86WZ6 799 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 C16orf52Q8NHV5 167 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ZNF75CPQ92670 426 aaPredicted RBP15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PPCDCQ96CD2 204 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ERP27Q96DN0 273 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 AKTIPQ9H8T0 292 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MEAF6Q9HAF1 191 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ASF1BQ9NVP2 202 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 BCAP29Q9UHQ4 241 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ERVK-11Q9UQG0 969 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 EIF3LQ9Y262 564 aaKnown RBP15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 CFL2Q9Y281 166 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NTNG1Q9Y2I2 539 aa15.07■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 C2orf92A0A1B0GVN3 265 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PDPK1O15530 556 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NME2P1O60361 137 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 VPS4BO75351 444 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NADKO95544 446 aaPredicted RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 KITP10721 976 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 DDX5P17844 614 aaKnown RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NME2P22392 152 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MRPS35P82673 323 aaKnown RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 DUSP8Q13202 625 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 PDE7AQ13946 482 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MAPKAPK3Q16644 382 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 TRMT12Q53H54 448 aaKnown RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ANKRD26P1Q6NSI1 321 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 OPN5Q6U736 354 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 IL20RBQ6UXL0 311 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 R3HCC1LQ7Z5L2 792 aaKnown RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SLC15A4Q8N697 577 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ZNF441Q8N8Z8 693 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 OR52R1Q8NGF1 315 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 GRHL3Q8TE85 626 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 DYDC1Q8WWB3 177 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 KAT2AQ92830 837 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 TP53INP1Q96A56 240 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MTERF3Q96E29 417 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 GLIPR2Q9H4G4 154 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 AGPAT4Q9NRZ5 378 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 RYDENQ9NUL5 291 aaKnown RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 ASIC5Q9NY37 505 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 NOP53Q9NZM5 478 aaKnown RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SH3BP4Q9P0V3 963 aa15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 MARCOQ9UEW3 520 aaPredicted RBP15.06■□□□□ 0
MSH5-SAPCD1-206ENST00000491552 SPENQ96T58 3664 aaKnown RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SLCO1B7G3V0H7 640 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 SCAMP2O15127 329 aaKnown RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 HDAC3O15379 428 aa15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 ZNF354AO60765 605 aaPredicted RBP15.05■□□□□ -0
MSH5-SAPCD1-206ENST00000491552 BCAS2O75934 225 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms