RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 UFM1P61960 85 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 RNF4P78317 190 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 BIKQ13323 160 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 MFAP5Q13361 173 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 PGS1Q32NB8 556 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 TRMT12Q53H54 448 aaKnown RBP10.26□□□□□ -0.77
UBE4B-210ENST00000488228 CPTPQ5TA50 214 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 ABHD17BQ5VST6 288 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 H3F3CQ6NXT2 135 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 HSDL2Q6YN16 418 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 R3HCC1LQ7Z5L2 792 aaKnown RBP10.26□□□□□ -0.77
UBE4B-210ENST00000488228 SPATA19Q7Z5L4 167 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 SAMD14Q8IZD0 417 aaPredicted RBP10.26□□□□□ -0.77
UBE4B-210ENST00000488228 OR7G2Q8NG99 324 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 CEP70Q8NHQ1 597 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF675Q8TD23 568 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 MTERF3Q96E29 417 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 TEX37Q96LM6 180 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 TMEM120AQ9BXJ8 343 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 DPY30Q9C005 99 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 ANKRD10Q9NXR5 420 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 PLA2G3Q9NZ20 509 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF451Q9Y4E5 1061 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 GPR45Q9Y5Y3 372 aa10.26□□□□□ -0.77
UBE4B-210ENST00000488228 TMEM200CA6NKL6 621 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 WWP2O00308 870 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 UBDO15205 165 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 ZFAND5O76080 213 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 WDPCPO95876 746 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 PRB1P04280 392 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 TROVE2P10155 538 aaKnown RBP eCLIP10.25□□□□□ -0.77
UBE4B-210ENST00000488228 IDO1P14902 403 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 S1PR1P21453 382 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 MPIP34949 423 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 MLF1P58340 268 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 C21orf58P58505 322 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 FUT7Q11130 342 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 EBPQ15125 230 aaKnown RBP10.25□□□□□ -0.77
UBE4B-210ENST00000488228 NNATQ16517 81 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 SPANXN4Q5MJ08 99 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 ACER2Q5QJU3 275 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 FHL5Q5TD97 284 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 OR4F3Q6IEY1 312 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 SZRD1Q7Z422 152 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 RPS19BP1Q86WX3 136 aaKnown RBP10.25□□□□□ -0.77
UBE4B-210ENST00000488228 PTRH1Q86Y79 214 aaKnown RBP10.25□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF615Q8N8J6 731 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 C7orf57Q8NEG2 295 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 OR52R1Q8NGF1 315 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 OR9I1Q8NGQ6 314 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 C16orf52Q8NHV5 167 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 CTHRC1Q96CG8 243 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 WBP1Q96G27 269 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 MAGED4Q96JG8 741 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF317Q96PQ6 595 aaPredicted RBP10.25□□□□□ -0.77
UBE4B-210ENST00000488228 CCDC28BQ9BUN5 200 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 DUSP26Q9BV47 211 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 ITPAQ9BY32 194 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 WWTR1Q9GZV5 400 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 SLC25A18Q9H1K4 315 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 OR10A5Q9H207 317 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 CDCP1Q9H5V8 836 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 CLMPQ9H6B4 373 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 EPS8L2Q9H6S3 715 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 LUZP4Q9P127 313 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 BCAP29Q9UHQ4 241 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 TEKT2Q9UIF3 430 aa10.25□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF462Q96JM2 2506 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF354AO60765 605 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 PRAMEF2O60811 474 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ITGA10O75578 1167 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 OR2J2O76002 312 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 C6orf47O95873 294 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ABCB1P08183 1280 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 GPX3P22352 226 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 IL12AP29459 219 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 GPC1P35052 558 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 FRKP42685 505 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 KIR3DL1P43629 444 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 CLNS1AP54105 237 aaKnown RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ARG2P78540 354 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 MAP4K2Q12851 820 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF155Q12901 538 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 NFATC3Q12968 1075 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 MEP1AQ16819 746 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 FAM174BQ3ZCQ3 159 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 NADK2Q4G0N4 442 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 PDCD4Q53EL6 469 aaKnown RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 SOWAHCQ53LP3 525 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF468Q5VIY5 522 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 IGFL2Q6UWQ7 119 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 SLC29A4Q7RTT9 530 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 CAMKMTQ7Z624 323 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ANKRD46Q86W74 232 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 CLECL1Q8IZS7 167 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 LGI4Q8N135 537 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 RBMXL3Q8N7X1 1067 aaKnown RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 OR7G1Q8NGA0 311 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms