RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 LOC110117498-PIK3R3F6TDL0 507 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 SLC28A2O43868 658 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 DNTTP04053 509 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 POU1F1P28069 291 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 GPC1P35052 558 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 IGFALSP35858 605 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 TP53BP2Q13625 1128 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 ANKRD54Q6NXT1 300 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 SYCE2Q6PIF2 218 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 TMEM64Q6YI46 380 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 LINC00471Q8N535 108 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 SRFBP1Q8NEF9 429 aaKnown RBP24.65■■□□□ 1.54
HLA-C-208ENST00000487245 OR8J1Q8NGP2 316 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 PIK3R3Q92569 461 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 RAB8BQ92930 207 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 SCARF2Q96GP6 870 aaPredicted RBP24.65■■□□□ 1.54
HLA-C-208ENST00000487245 TMEM80Q96HE8 168 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 TXNDC15Q96J42 360 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 AMDHD1Q96NU7 426 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 GLIPR2Q9H4G4 154 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 SERHL2Q9H4I8 314 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 C11orf16Q9NQ32 467 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 MOSPD1Q9UJG1 213 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 RPL36Q9Y3U8 105 aaKnown RBP24.65■■□□□ 1.54
HLA-C-208ENST00000487245 K7EQS6 105 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 PPP2R1BP30154 601 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 BCL6P41182 706 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 XKP51811 444 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 ATAT1Q5SQI0 421 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 SLC25A30Q5SVS4 291 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 BHLHB9Q6PI77 547 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 TRIM69Q86WT6 500 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 KRT73Q86Y46 540 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 SFXN5Q8TD22 340 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 CHAC2Q8WUX2 184 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 BBS4Q96RK4 519 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 SEMA3GQ9NS98 782 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 QPCTLQ9NXS2 382 aa24.64■■□□□ 1.54
HLA-C-208ENST00000487245 OR10H3O60404 316 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 NTSR1P30989 418 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 SEC13P55735 322 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 COX10Q12887 443 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 RPE65Q16518 533 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 NDUFA9Q16795 377 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 LEXMQ3ZCV2 418 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 PARM1Q6UWI2 310 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 NCCRP1Q6ZVX7 275 aaPredicted RBP24.64■■□□□ 1.53
HLA-C-208ENST00000487245 AMER3Q8N944 861 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 POC5Q8NA72 575 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 OR4D11Q8NGI4 311 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 ASB12Q8WXK4 309 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 HPS1Q92902 700 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 SPATA5L1Q9BVQ7 753 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 C3orf14Q9HBI5 128 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 HHATLQ9HCP6 504 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 CRNNQ9UBG3 495 aaPredicted RBP24.64■■□□□ 1.53
HLA-C-208ENST00000487245 ITGB1BP2Q9UKP3 347 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 PCDHGB6Q9Y5F9 930 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 COLEC10Q9Y6Z7 277 aa24.64■■□□□ 1.53
HLA-C-208ENST00000487245 A0A1W2PRQ8 180 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 PRR23AA6NEV1 266 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 MAN2B1O00754 1011 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 LATO43561 262 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 GPX5O75715 221 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 TP53P04637 393 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-208ENST00000487245 HOXC4P09017 264 aaPredicted RBP24.63■■□□□ 1.53
HLA-C-208ENST00000487245 CMPK1P30085 196 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 TSFMP43897 325 aaKnown RBP24.63■■□□□ 1.53
HLA-C-208ENST00000487245 KHKP50053 298 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 SLC13A2Q13183 592 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 GNA13Q14344 377 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 MFSD4BQ5TF39 518 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 CASP12Q6UXS9 341 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 ZNF793Q6ZN11 406 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 GALNT6Q8NCL4 622 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 MOAP1Q96BY2 351 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 MS4A6EQ96DS6 147 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 AICDAQ9GZX7 198 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 POLR2J3Q9H1A7 115 aaKnown RBP24.63■■□□□ 1.53
HLA-C-208ENST00000487245 OR51I1Q9H343 314 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 KIR3DX1Q9H7L2 352 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 BCL2L10Q9HD36 194 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 SLC6A20Q9NP91 592 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 SEC14L3Q9UDX4 400 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 A4GNTQ9UNA3 340 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 PLEKHM1Q9Y4G2 1056 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 DOCK8Q8NF50 2099 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 HEATR5BQ9P2D3 2071 aa24.63■■□□□ 1.53
HLA-C-208ENST00000487245 LAMP2P13473 410 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 TMED10P49755 219 aaKnown RBP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 SLAMF1Q13291 335 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 MRM1Q6IN84 353 aaKnown RBP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 DEF8Q6ZN54 512 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 FAM83FQ8NEG4 500 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 OR2L3Q8NG85 312 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 BBS10Q8TAM1 723 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 IL4I1Q96RQ9 567 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 GABRG3Q99928 467 aa24.62■■□□□ 1.53
HLA-C-208ENST00000487245 TREX2Q9BQ50 279 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-208ENST00000487245 CCDC32Q9BV29 185 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms