RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PTGDR2Q9Y5Y4 395 aa11.57□□□□□ -0.56
PTCD1-205ENST00000485746 TP53I11O14683 189 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 TM9SF1O15321 606 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 ATP1B1P05026 303 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 FGF4P08620 206 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 ABOP16442 354 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 DDCP20711 480 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 SERPINB4P48594 390 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 TMED10P49755 219 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 NCBP2P52298 156 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 PPIAP62937 165 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 RPL38P63173 70 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 RPP38P78345 283 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 SRSF1Q07955 248 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 LTB4RQ15722 352 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 CHI3L2Q15782 390 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 PRICKLE4Q2TBC4 344 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 C4orf17Q53FE4 359 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 HHATQ5VTY9 493 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 C1QL3Q5VWW1 255 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 GK5Q6ZS86 529 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 FJX1Q86VR8 437 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 TICAM1Q8IUC6 712 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 DND1Q8IYX4 353 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 FAM9CQ8IZT9 166 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 GHDCQ8N2G8 530 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 GOLM1Q8NBJ4 401 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 OR2M7Q8NG81 312 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 OR52R1Q8NGF1 315 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 KAT2AQ92830 837 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 GFM2Q969S9 779 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 TP53INP1Q96A56 240 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 SPACA9Q96E40 222 aaPredicted RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 CNRIP1Q96F85 164 aaPredicted RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 METTL2AQ96IZ6 378 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 MYNNQ9NPC7 610 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
PTCD1-205ENST00000485746 MAT2BQ9NZL9 334 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 ACTL7BQ9Y614 415 aa11.56□□□□□ -0.56
PTCD1-205ENST00000485746 TMEM233B4DJY2 109 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 PIP5K1BO14986 540 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 BIRC5O15392 142 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 AKAP10O43572 662 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 HS6ST1O60243 411 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 BCAS2O75934 225 aaPredicted RBP11.55□□□□□ -0.56
PTCD1-205ENST00000485746 PDE9AO76083 593 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 CLPSP04118 112 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 SERPINE1P05121 402 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 CCL3P10147 92 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
PTCD1-205ENST00000485746 PCSK2P16519 638 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 MAPK1P28482 360 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 DUSP2Q05923 314 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 TRMT12Q53H54 448 aaKnown RBP11.55□□□□□ -0.56
PTCD1-205ENST00000485746 FAM71E1Q6IPT2 247 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 PAOXQ6QHF9 649 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 TMEM64Q6YI46 380 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 SLC22A16Q86VW1 577 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF615Q8N8J6 731 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 OR9A2Q8NGT5 310 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 C16orf52Q8NHV5 167 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 PGM2Q96G03 612 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 PPP3R2Q96LZ3 170 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 JSRP1Q96MG2 331 aaPredicted RBP11.55□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF681Q96N22 645 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 DEFB127Q9H1M4 99 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
PTCD1-205ENST00000485746 ZDHHC2Q9UIJ5 367 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 ERRFI1Q9UJM3 462 aaPredicted RBP11.55□□□□□ -0.56
PTCD1-205ENST00000485746 TMED5Q9Y3A6 229 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 DNAJC15Q9Y5T4 150 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 NPFFR2Q9Y5X5 522 aa11.55□□□□□ -0.56
PTCD1-205ENST00000485746 CLEC18AA5D8T8 446 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 FAM166BA8MTA8 275 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 TMEM114B3SHH9 223 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 CCL21O00585 134 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF354AO60765 605 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 PEX11AO75192 247 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 SKAP2O75563 359 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 LRATO95237 230 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 NADKO95544 446 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 JUNP05412 331 aaKnown RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 STSP08842 583 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 FBXO45P0C2W1 286 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 DDX5P17844 614 aaKnown RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 S1PR1P21453 382 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 PRPH2P23942 346 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 PIGAP37287 484 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 ETV4P43268 484 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 DNASE1L1P49184 302 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 ABCE1P61221 599 aaKnown RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 DCAF7P61962 342 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 KCNJ2P63252 427 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 MRPS35P82673 323 aaKnown RBP11.54□□□□□ -0.56
PTCD1-205ENST00000485746 MGAT2Q10469 447 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 STX3Q13277 289 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 NNATQ16517 81 aa11.54□□□□□ -0.56
PTCD1-205ENST00000485746 ZNF791Q3KP31 576 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms