RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 TAGAPQ8N103 731 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 TTC29Q8NA56 475 aaPredicted RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 CHDHQ8NE62 594 aaPredicted RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 OR10G2Q8NGC3 310 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 OR4K14Q8NGD5 310 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 OR4C15Q8NGM1 316 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 PHF10Q8WUB8 498 aaKnown RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 ZFAND2BQ8WV99 257 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 IPCEF1Q8WWN9 437 aaPredicted RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 TANKQ92844 425 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 CNRIP1Q96F85 164 aaPredicted RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 ZNF681Q96N22 645 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 TRNT1Q96Q11 434 aaKnown RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 CD180Q99467 661 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 NRTNQ99748 197 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 MAPKAP1Q9BPZ7 522 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 TREX2Q9BQ50 279 aaPredicted RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 ORAI3Q9BRQ5 295 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 LRRC61Q9BV99 259 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 PINK1Q9BXM7 581 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 ACTRT3Q9BYD9 372 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 OR51I1Q9H343 314 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 RIBC2Q9H4K1 309 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 GIN1Q9NXP7 522 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 VNN3Q9NY84 501 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 RSL24D1Q9UHA3 163 aaKnown RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 FBXL21Q9UKT6 434 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 FBXW2Q9UKT8 454 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 PNMA8BQ9ULN7 279 aaPredicted RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 NDRG4Q9ULP0 352 aaKnown RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 TMCC3Q9ULS5 477 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 CA14Q9ULX7 337 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 NAALAD2Q9Y3Q0 740 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 PCDHGB5Q9Y5G0 923 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 GMPPBQ9Y5P6 360 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 SNX5Q9Y5X3 404 aa9.08□□□□□ -0.96
UFD1-208ENST00000484101 GCN1Q92616 2671 aaKnown RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
UFD1-208ENST00000484101 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 SPEGQ15772 3267 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 TP53BP1Q12888 1972 aaPredicted RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 A0A087WV62 115 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 PRAMEF33A0A0G2JMD5 474 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 A0A0J9YVX5 310 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 A0A1W2PR77 199 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 CCDC160A6NGH7 325 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 C4orf51C9J302 202 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 E9PQ18 207 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 H0YGG7 62 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 SCAMP1O15126 338 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 AXIN1O15169 862 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 SRPX2O60687 465 aaPredicted RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 SEC24DO94855 1032 aaPredicted RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 GADD45GO95257 159 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 ZIC2O95409 532 aaPredicted RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 OPN1SWP03999 348 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 CD72P21854 359 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 GSTT1P30711 240 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 PIGAP37287 484 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 CAPZBP47756 277 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 LIMS1P48059 325 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 EMP3P54852 163 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 LIM2P55344 173 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 RAB8AP61006 207 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 ARF3P61204 181 aaPredicted RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 ISL1P61371 349 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 HNRNPKP61978 463 aaKnown RBP eCLIP9.07□□□□□ -0.964e-6■■■□□ 18
UFD1-208ENST00000484101 CD47Q08722 323 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 DMWDQ09019 674 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 NPRL3Q12980 569 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 TCEA2Q15560 299 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 GARNL3Q5VVW2 1013 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 CEP68Q76N32 757 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 SZRD1Q7Z422 152 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 HS3ST5Q8IZT8 346 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 GALNT15Q8N3T1 639 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 CSNK1A1LQ8N752 337 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 C19orf47Q8N9M1 422 aaKnown RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 FAM46DQ8NEK8 389 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 TOR1AIP2Q8NFQ8 470 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 ZNF675Q8TD23 568 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 APOBEC4Q8WW27 367 aaKnown RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 ELP4Q96EB1 424 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 TCTN2Q96GX1 697 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 HRASLS5Q96KN8 279 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 C10orf90Q96M02 699 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 SLC6A18Q96N87 628 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 BCL7BQ9BQE9 202 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 POLR2J2Q9GZM3 115 aaKnown RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 RAB33BQ9H082 229 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 POLR2J3Q9H1A7 115 aaKnown RBP9.07□□□□□ -0.96
UFD1-208ENST00000484101 ADNPQ9H2P0 1102 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 ANKRD19PQ9H560 264 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 TRPC4Q9UBN4 977 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 SLC13A4Q9UKG4 626 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 ACAD8Q9UKU7 415 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
UFD1-208ENST00000484101 MGAT4BQ9UQ53 548 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms