RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MTFR2Q6P444 385 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 MRGPRGQ86SM5 289 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 CD163Q86VB7 1156 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 DOLPP1Q86YN1 238 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF808Q8N4W9 903 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 FAM13CQ8NE31 585 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 OR10G3Q8NGC4 313 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 RDH11Q8TC12 318 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 AENQ8WTP8 325 aaKnown RBP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 ADIPOR1Q96A54 375 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 C11orf24Q96F05 449 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 EBPLQ9BY08 206 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 SHCBP1LQ9BZQ2 653 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 ZDHHC11Q9H8X9 412 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 MAT2BQ9NZL9 334 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 DLGAP4Q9Y2H0 992 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 MEMO1Q9Y316 297 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 LIPGQ9Y5X9 500 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 CHCHD2Q9Y6H1 151 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 ARHGAP21Q5T5U3 1957 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 GNG14A0A1W2PPG7 69 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 PRRG2O14669 202 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF500O60304 480 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-203ENST00000474056 LRATO95237 230 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.24
UPF3A-203ENST00000474056 ATP1B1P05026 303 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 TPOP07202 933 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 CSNK2A2P19784 350 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-203ENST00000474056 SERPINB3P29508 390 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 PTGS2P35354 604 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 MAGEA5P43359 124 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 NAA20P61599 178 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 DUSP8Q13202 625 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 PCLAFQ15004 111 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 EXOSC7Q15024 291 aaKnown RBP16.52■□□□□ 0.24
UPF3A-203ENST00000474056 LTB4RQ15722 352 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 NTRK2Q16620 822 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 LIPMQ5VYY2 423 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 HLA-DQA1Q5Y7H0 255 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 TMEM64Q6YI46 380 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 C3P1Q6ZMU1 363 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 TRABD2AQ86V40 505 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 SLC22A16Q86VW1 577 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 TAGAPQ8N103 731 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 VWA5B2Q8N398 1253 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 FBXW8Q8N3Y1 598 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 RIBC1Q8N443 379 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-203ENST00000474056 TMEM251Q8N6I4 163 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 SIMC1Q8NDZ2 872 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 ADCY4Q8NFM4 1077 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 C16orf78Q8WTQ4 265 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF681Q96N22 645 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 IL1RL2Q9HB29 575 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 PROK2Q9HC23 129 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 MKS1Q9NXB0 559 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 UTS2RQ9UKP6 389 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 PSME2Q9UL46 239 aa16.52■□□□□ 0.24
UPF3A-203ENST00000474056 PKDREJQ9NTG1 2253 aa16.52■□□□□ 0.23
UPF3A-203ENST00000474056 PRSS44E7EML9 344 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 CBX7O95931 251 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 GPX3P22352 226 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 MAP4K2Q12851 820 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 WDR93Q6P2C0 686 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 RPTNQ6XPR3 784 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 RGS9BPQ6ZS82 235 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 C10orf107Q8IVU9 208 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 DND1Q8IYX4 353 aaKnown RBP16.51■□□□□ 0.23
UPF3A-203ENST00000474056 LRRC25Q8N386 305 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-203ENST00000474056 OR7G1Q8NGA0 311 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 OR5M3Q8NGP4 307 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 FAM57AQ8TBR7 257 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 TP53INP1Q96A56 240 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 CTHRC1Q96CG8 243 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 APOPT1Q96IL0 206 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 LGALS13Q9UHV8 139 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 ZNF639Q9UID6 485 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 MID2Q9UJV3 735 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 CNOT11Q9UKZ1 510 aaKnown RBP16.51■□□□□ 0.23
UPF3A-203ENST00000474056 PLLPQ9Y342 182 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 ZNF780BQ9Y6R6 833 aa16.51■□□□□ 0.23
UPF3A-203ENST00000474056 H3BQF6 201 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 ADAM10O14672 748 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 CRCPO75575 148 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 CELA3AP09093 270 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 DRD2P14416 443 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 GRNP28799 593 aaKnown RBP16.5■□□□□ 0.23
UPF3A-203ENST00000474056 FBXW4P57775 412 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 MRPS35P82673 323 aaKnown RBP16.5■□□□□ 0.23
UPF3A-203ENST00000474056 IFFO1Q0D2I5 559 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 IMPG1Q17R60 797 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 HYAL4Q2M3T9 481 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 TRMT12Q53H54 448 aaKnown RBP16.5■□□□□ 0.23
UPF3A-203ENST00000474056 SPDYAQ5MJ70 313 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 ARHGAP11AQ6P4F7 1023 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 EMBQ6PCB8 327 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 SRRM1Q8IYB3 904 aaKnown RBP16.5■□□□□ 0.23
UPF3A-203ENST00000474056 PRR22Q8IZ63 422 aa16.5■□□□□ 0.23
UPF3A-203ENST00000474056 FAM109AQ8N4B1 249 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms