RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 PTPN4P29074 926 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 CCT3P49368 545 aaKnown RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 DUSP8Q13202 625 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 TP53BP2Q13625 1128 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 MLC1Q15049 377 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 COQ5Q5HYK3 327 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 NANOGP8Q6NSW7 305 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 SAMD14Q8IZD0 417 aaPredicted RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 GOT1L1Q8NHS2 421 aaPredicted RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 NANOGQ9H9S0 305 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 ZCCHC3Q9NUD5 404 aaKnown RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 NXT1Q9UKK6 140 aaKnown RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 HS3ST3B1Q9Y662 390 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 ERN1O75460 977 aaKnown RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 SORBS2O94875 1100 aaKnown RBP18.85■□□□□ 0.61
SPIN1-203ENST00000469017 KRT16P08779 473 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 TRPC1P48995 793 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 TBC1D25Q3MII6 688 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 COX20Q5RI15 118 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 VWA5B2Q8N398 1253 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 NATD1Q8N6N6 113 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 CLPTM1LQ96KA5 538 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 TUBB6Q9BUF5 446 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 OR8D2Q9GZM6 311 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 NEUROD4Q9HD90 331 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 ADAP2Q9NPF8 381 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 GPATCH2Q9NW75 528 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 USP22Q9UPT9 525 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 CLCA3PQ9Y6N3 262 aa18.85■□□□□ 0.61
SPIN1-203ENST00000469017 RAB40ALP0C0E4 278 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 LIPCP11150 499 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 LIFP15018 202 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 S1PR1P21453 382 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 SLC6A2P23975 617 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 CHI3L1P36222 383 aaPredicted RBP18.84■□□□□ 0.61
SPIN1-203ENST00000469017 PSME3P61289 254 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 ZFP90Q8TF47 636 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 C16orf58Q96GQ5 468 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 ANKRD27Q96NW4 1050 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 WDR77Q9BQA1 342 aaPredicted RBP18.84■□□□□ 0.61
SPIN1-203ENST00000469017 GPATCH1Q9BRR8 931 aaKnown RBP18.84■□□□□ 0.61
SPIN1-203ENST00000469017 TPT1P8Q9HAU6 139 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 DDX18Q9NVP1 670 aaKnown RBP18.84■□□□□ 0.61
SPIN1-203ENST00000469017 GID8Q9NWU2 228 aa18.84■□□□□ 0.61
SPIN1-203ENST00000469017 CLIC1O00299 241 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 GYG2O15488 501 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 CBX7O95931 251 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 CD82P27701 267 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 MNAT1P51948 309 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 SLC7A2P52569 658 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 RUNDC3AQ59EK9 446 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.83■□□□□ 0.61
SPIN1-203ENST00000469017 ATP1A1-AS1Q5TC04 95 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 FHL5Q5TD97 284 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 C8orf82Q6P1X6 216 aaPredicted RBP18.83■□□□□ 0.61
SPIN1-203ENST00000469017 TMEM205Q6UW68 189 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 CPEB2Q7Z5Q1 589 aaKnown RBP18.83■□□□□ 0.61
SPIN1-203ENST00000469017 NUP43Q8NFH3 380 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 OR52R1Q8NGF1 315 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 PSMA8Q8TAA3 256 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 ROPN1LQ96C74 230 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 CTHRC1Q96CG8 243 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 GPN2Q9H9Y4 310 aaPredicted RBP18.83■□□□□ 0.61
SPIN1-203ENST00000469017 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.83■□□□□ 0.61
SPIN1-203ENST00000469017 CMTM6Q9NX76 183 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 BCAP29Q9UHQ4 241 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 DTX4Q9Y2E6 619 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 PADI2Q9Y2J8 665 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 MSRB2Q9Y3D2 182 aa18.83■□□□□ 0.61
SPIN1-203ENST00000469017 TLX3O43711 291 aaPredicted RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 WT1P19544 449 aaPredicted RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 MSX2P35548 267 aaPredicted RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 ELAVL1Q15717 326 aaKnown RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 PAPD4Q6PIY7 484 aaKnown RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 KIRREL2Q6UWL6 708 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 C6orf120Q7Z4R8 191 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 RNF130Q86XS8 419 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 SLC2A12Q8TD20 617 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 SENP5Q96HI0 755 aaPredicted RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 CPPED1Q9BRF8 314 aaPredicted RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 THUMPD3Q9BV44 507 aaKnown RBP18.83■□□□□ 0.6
SPIN1-203ENST00000469017 SERHL2Q9H4I8 314 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 SEMA3GQ9NS98 782 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 APC2O95996 2303 aa18.83■□□□□ 0.6
SPIN1-203ENST00000469017 C21orf140B9A014 251 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 DDAH2O95865 285 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 CELA2AP08217 269 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 UQCRC2P22695 453 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
SPIN1-203ENST00000469017 LASP1Q14847 261 aaKnown RBP18.82■□□□□ 0.6
SPIN1-203ENST00000469017 LACTB2Q53H82 288 aaPredicted RBP18.82■□□□□ 0.6
SPIN1-203ENST00000469017 ZNF771Q7L3S4 317 aaPredicted RBP18.82■□□□□ 0.6
SPIN1-203ENST00000469017 PPP1R32Q7Z5V6 425 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 FAM156AQ8NDB6 213 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 OR5D16Q8NGK9 328 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 ZNF578Q96N58 590 aaPredicted RBP18.82■□□□□ 0.6
SPIN1-203ENST00000469017 PHF12Q96QT6 1004 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 CDRT15Q96T59 188 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 BTBD10Q9BSF8 475 aa18.82■□□□□ 0.6
SPIN1-203ENST00000469017 ADA2Q9NZK5 511 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms