RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF223Q9UK11 482 aaPredicted RBP14.89□□□□□ -0.03
GPC1-207ENST00000466624 ERVK-19Q9WJR5 959 aa14.89□□□□□ -0.03
GPC1-207ENST00000466624 NUP214P35658 2090 aaPredicted RBP14.89□□□□□ -0.03
GPC1-207ENST00000466624 MASP2O00187 686 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 SLC22A2O15244 555 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 CLPSP04118 112 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 ITGAMP11215 1152 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 ITGA3P26006 1051 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 SLC37A1P57057 533 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 PHC1P78364 1004 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 RHDQ02161 417 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 SF3A3Q12874 501 aaKnown RBP eCLIP14.88□□□□□ -0.03
GPC1-207ENST00000466624 HSPB3Q12988 150 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 MYBPC3Q14896 1274 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 COL28A1Q2UY09 1125 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 FHL5Q5TD97 284 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 BLOC1S3Q6QNY0 202 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 HSDL2Q6YN16 418 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 RNF111Q6ZNA4 994 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 ZNF551Q7Z340 670 aaPredicted RBP14.88□□□□□ -0.03
GPC1-207ENST00000466624 FUNDC1Q8IVP5 155 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 LGI4Q8N135 537 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 OR2L13Q8N349 312 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 ZNF615Q8N8J6 731 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 ADCY4Q8NFM4 1077 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 TSPEARQ8WU66 669 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 PSMF1Q92530 271 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 ELP4Q96EB1 424 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 CRELD1Q96HD1 420 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 NUDT9Q9BW91 350 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 SAR1AQ9NR31 198 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 NTMQ9P121 344 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 BTNL2Q9UIR0 455 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 CFL2Q9Y281 166 aa14.88□□□□□ -0.03
GPC1-207ENST00000466624 PCDHGA9Q9Y5G4 932 aaKnown RBP14.88□□□□□ -0.03
GPC1-207ENST00000466624 ZZEF1O43149 2961 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 TRBV11-1A0A0K0K1C0 115 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 HRKO00198 91 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 CDK2AP1O14519 115 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 PRAMEF2O60811 474 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 CCDC22O60826 627 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 ZFAND5O76080 213 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 PSMG1O95456 288 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 CBX7O95931 251 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 CELA2AP08217 269 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 GPC1P35052 558 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 KCNK10P57789 538 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 MRPS35P82673 323 aaKnown RBP14.87□□□□□ -0.03
GPC1-207ENST00000466624 TRMT12Q53H54 448 aaKnown RBP14.87□□□□□ -0.03
GPC1-207ENST00000466624 TMEM64Q6YI46 380 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 ZNF321PQ8N8H1 164 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 OR7G2Q8NG99 324 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 OR5L2Q8NGL0 311 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 GOT1L1Q8NHS2 421 aaPredicted RBP14.87□□□□□ -0.03
GPC1-207ENST00000466624 NUBPLQ8TB37 319 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 KAT2AQ92830 837 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 CCDC115Q96NT0 180 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 OR52E6Q96RD3 313 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 DEFB126Q9BYW3 111 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 OR10A5Q9H207 317 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 TAS2R9Q9NYW1 312 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 CCDC167Q9P0B6 97 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 C19orf53Q9UNZ5 99 aaPredicted RBP14.87□□□□□ -0.03
GPC1-207ENST00000466624 ARL2BPQ9Y2Y0 163 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 LOC400499M0QZD8 3231 aa14.87□□□□□ -0.03
GPC1-207ENST00000466624 C9JVG2 144 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 CFLARO15519 480 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 COQ9O75208 318 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 DNAJB5O75953 348 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 C6orf47O95873 294 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SSTR4P31391 388 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 PTGER1P34995 402 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SOX11P35716 441 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 MC3RP41968 323 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 CDK9P50750 372 aaKnown RBP14.86□□□□□ -0.03
GPC1-207ENST00000466624 CCL11P51671 97 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 DGKQP52824 942 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 HBA1P69905 142 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 RNF4P78317 190 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 AGKQ53H12 422 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 CRB2Q5IJ48 1285 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 C19orf48Q6RUI8 117 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 TMEM107Q6UX40 140 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SLC29A4Q7RTT9 530 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 C9orf40Q8IXQ3 194 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 KIF2BQ8N4N8 673 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SLC5A8Q8N695 610 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 ANKS4BQ8N8V4 417 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 C17orf47Q8NEP4 570 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SFXN5Q8TD22 340 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 BRIX1Q8TDN6 353 aaKnown RBP14.86□□□□□ -0.03
GPC1-207ENST00000466624 TTC9Q92623 222 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 EXTL1Q92935 676 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 MOAP1Q96BY2 351 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 ADNPQ9H2P0 1102 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 ZNF552Q9H707 407 aaPredicted RBP14.86□□□□□ -0.03
GPC1-207ENST00000466624 RMND5AQ9H871 391 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 C3orf14Q9HBI5 128 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SLC52A3Q9NQ40 469 aa14.86□□□□□ -0.03
GPC1-207ENST00000466624 SIRT3Q9NTG7 399 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms