RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SLC29A4Q7RTT9 530 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 VWA5B2Q8N398 1253 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 TMEM156Q8N614 296 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF615Q8N8J6 731 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SIMC1Q8NDZ2 872 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 OR9A2Q8NGT5 310 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SUN3Q8TAQ9 357 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 PPCDCQ96CD2 204 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SIGLEC12Q96PQ1 595 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 GAL3ST4Q96RP7 486 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 OR10A5Q9H207 317 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 MEAF6Q9HAF1 191 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SLCO1B3Q9NPD5 702 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SH3BP4Q9P0V3 963 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 LRFN1Q9P244 771 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 BCAP29Q9UHQ4 241 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF639Q9UID6 485 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 GTF3C1Q12789 2109 aa11.48□□□□□ -0.57
CHPF2-202ENST00000465601 SPENQ96T58 3664 aaKnown RBP11.48□□□□□ -0.57
CHPF2-202ENST00000465601 POLEQ07864 2286 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 FREM3P0C091 2139 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 TRPC5OSA6NMA1 111 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 SLCO1B7G3V0H7 640 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF354AO60765 605 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 PRAMEF2O60811 474 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 VPS4BO75351 444 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 G6PDP11413 515 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 LBPP18428 481 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 NTSP30990 170 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 TRHRP34981 398 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 CYB561P49447 251 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 HLCSP50747 726 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 SSR4P51571 173 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 NCBP2P52298 156 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 DIO3P55073 304 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 DUSP8Q13202 625 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 MAD2L1Q13257 205 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 EBPQ15125 230 aaKnown RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 SMU1Q2TAY7 513 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 PRR30Q53SZ7 412 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF628Q5EBL2 1059 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 LARP4Q71RC2 724 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 FAM9CQ8IZT9 166 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 KRTCAP2Q8N6L1 136 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 MDS2Q8NDY4 140 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 OR7G1Q8NGA0 311 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 OR7A2PQ8NGA2 310 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 NUBPLQ8TB37 319 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 PIWIL2Q8TC59 973 aaKnown RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF675Q8TD23 568 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 ASB15Q8WXK1 588 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 CIDECQ96AQ7 238 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 RASL10BQ96S79 203 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 HES7Q9BYE0 225 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 TRIM4Q9C037 500 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 WWTR1Q9GZV5 400 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 GLIPR2Q9H4G4 154 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 WDR55Q9H6Y2 383 aaPredicted RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 ANKRA2Q9H9E1 313 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 KLHL1Q9NR64 748 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 NOP53Q9NZM5 478 aaKnown RBP11.47□□□□□ -0.57
CHPF2-202ENST00000465601 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF407Q9C0G0 2248 aa11.47□□□□□ -0.57
CHPF2-202ENST00000465601 C2orf92A0A1B0GVN3 265 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 OR6C76A6NM76 312 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 TBX19O60806 448 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 NME6O75414 186 aaPredicted RBP11.46□□□□□ -0.57
CHPF2-202ENST00000465601 NEURL1O76050 574 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 OR6B1O95007 311 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 CBX7O95931 251 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 EFNA1P20827 205 aaPredicted RBP11.46□□□□□ -0.57
CHPF2-202ENST00000465601 EPHA3P29320 983 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 HPCAL1P37235 193 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 SOX3P41225 446 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 NR0B1P51843 470 aaKnown RBP11.46□□□□□ -0.57
CHPF2-202ENST00000465601 TLE1Q04724 770 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 PDE7AQ13946 482 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 INPP5JQ15735 1006 aaPredicted RBP11.46□□□□□ -0.57
CHPF2-202ENST00000465601 MPEG1Q2M385 716 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 HSP90B2PQ58FF3 399 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF766Q5HY98 468 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 HLA-DQA1Q5Y7H0 255 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 IL20RBQ6UXL0 311 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF551Q7Z340 670 aaPredicted RBP11.46□□□□□ -0.57
CHPF2-202ENST00000465601 MAVSQ7Z434 540 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 R3HCC1LQ7Z5L2 792 aaKnown RBP11.46□□□□□ -0.57
CHPF2-202ENST00000465601 ZNF227Q86WZ6 799 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 HORMAD2Q8N7B1 307 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 OR52R1Q8NGF1 315 aa11.46□□□□□ -0.57
CHPF2-202ENST00000465601 C16orf52Q8NHV5 167 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms