RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LINC00518Q8N0U6 118 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 ARL6IP6Q8N6S5 226 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 EEF2KMTQ96G04 330 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 DCTPP1Q9H773 170 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 DNAJC11Q9NVH1 559 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 TMCC3Q9ULS5 477 aa4.42□□□□□ -1.7
PTCD3-205ENST00000464541 FAM168BA1KXE4 195 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 GMNNO75496 209 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 RHBDL1O75783 438 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 GOT2P00505 430 aaKnown RBP4.41□□□□□ -1.7
PTCD3-205ENST00000464541 APRTP07741 180 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 UMPSP11172 480 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 TNFRSF4P43489 277 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 NSFP46459 744 aaKnown RBP4.41□□□□□ -1.7
PTCD3-205ENST00000464541 TKTL1P51854 596 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 MFAP2P55001 183 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 UCP2P55851 309 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 HERV-K104P63124 156 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 TSTA3Q13630 321 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-205ENST00000464541 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-205ENST00000464541 KRT31Q15323 416 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 LTB4RQ15722 352 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 STEAP1BQ6NZ63 245 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 PAMR1Q6UXH9 720 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 OR4A16Q8NH70 328 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 RNASE8Q8TDE3 154 aaKnown RBP4.41□□□□□ -1.7
PTCD3-205ENST00000464541 RAB39BQ96DA2 213 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
PTCD3-205ENST00000464541 COG3Q96JB2 828 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 GPR137Q96N19 417 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 TRPV6Q9H1D0 765 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 TAS2R16Q9NYV7 291 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 RAI14Q9P0K7 980 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 MTRRQ9UBK8 725 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 NARFQ9UHQ1 456 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 KIF25-AS1Q9Y6Z4 181 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 FAM205AQ6ZU69 1335 aa4.41□□□□□ -1.7
PTCD3-205ENST00000464541 RALGAPA1Q6GYQ0 2036 aa4.4□□□□□ -1.7
PTCD3-205ENST00000464541 C5orf51A6NDU8 294 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 EEF2KO00418 725 aaKnown RBP4.4□□□□□ -1.71
PTCD3-205ENST00000464541 CPLX1O14810 134 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 FNTAP49354 379 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 SLC7A2P52569 658 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 PDE7AQ13946 482 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 EXOSC7Q15024 291 aaKnown RBP4.4□□□□□ -1.71
PTCD3-205ENST00000464541 RNF212Q495C1 297 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 EPC2Q52LR7 807 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 SLC10A5Q5PT55 438 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 TAF3Q5VWG9 929 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 NKAIN2Q5VXU1 208 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 HIST2H2AA3Q6FI13 130 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 MFSD7Q6UXD7 560 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 STOX1Q6ZVD7 989 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 PPP1R16AQ96I34 528 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 CNOT6LQ96LI5 555 aaKnown RBP4.4□□□□□ -1.71
PTCD3-205ENST00000464541 RANBP9Q96S59 729 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 TSPY26PQ9H489 355 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 IMPAD1Q9NX62 359 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 ERVK-18Q9QC07 812 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 EMCNQ9ULC0 261 aa4.4□□□□□ -1.71
PTCD3-205ENST00000464541 NPIPA5A0A0B4J1W7 369 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 NPIPA5E9PKD4 350 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 IGHG3P01860 377 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 STMN1P16949 149 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 KIF5BP33176 963 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 ACADSBP45954 432 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 ARHGDIAP52565 204 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 IST1P53990 364 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 PPP2R5CQ13362 524 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 PPP1R3AQ16821 1122 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 MICAQ29983 383 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 FHL5Q5TD97 284 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 C11orf53Q8IXP5 236 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 TEX9Q8N6V9 391 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 CRYGNQ8WXF5 182 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 SLCO4A1Q96BD0 722 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 BIRC7Q96CA5 298 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 GPR174Q9BXC1 333 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 TRIM9Q9C026 710 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 XPO4Q9C0E2 1151 aaKnown RBP4.39□□□□□ -1.71
PTCD3-205ENST00000464541 SLITRK2Q9H156 845 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 RNF41Q9H4P4 317 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-205ENST00000464541 AKAP7Q9P0M2 348 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-205ENST00000464541 RCOR3Q9P2K3 495 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-205ENST00000464541 RSPH14Q9UHP6 348 aa4.39□□□□□ -1.71
PTCD3-205ENST00000464541 CYB561D2O14569 222 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 SH2D1BO14796 132 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 HTATSF1O43719 755 aaKnown RBP4.38□□□□□ -1.71
PTCD3-205ENST00000464541 REC8O95072 547 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 PRAMEF12O95522 483 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 HIST1H2AGP0C0S8 130 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-205ENST00000464541 ZNF18P17022 549 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 UCP1P25874 307 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 ARF5P84085 180 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 CCZ1BP86790 482 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 CCZ1P86791 482 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-205ENST00000464541 C2orf76Q3KRA6 126 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 ACER2Q5QJU3 275 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 FAM219BQ5XKK7 198 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms