RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MC3RP41968 323 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 CCT3P49368 545 aaKnown RBP13.39□□□□□ -0.27
COL6A1-202ENST00000463060 PSME3P61289 254 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 MRPS35P82673 323 aaKnown RBP13.39□□□□□ -0.27
COL6A1-202ENST00000463060 DUSP8Q13202 625 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 SELPLGQ14242 412 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 TGIF1Q15583 401 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 EXOSC6Q5RKV6 272 aaKnown RBP13.39□□□□□ -0.27
COL6A1-202ENST00000463060 SAXO2Q658L1 398 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 DNAJC14Q6Y2X3 702 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-202ENST00000463060 SLC15A3Q8IY34 581 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 OR8J3Q8NGG0 315 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 SFXN5Q8TD22 340 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 RIT1Q92963 219 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 TMEM125Q96AQ2 219 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 NACC2Q96BF6 587 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 NEURL3Q96EH8 262 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 AURKBQ96GD4 344 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-202ENST00000463060 LRMDAQ9H2I8 198 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 CMTM6Q9NX76 183 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 TMEM181Q9P2C4 612 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 ABCD2Q9UBJ2 740 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 HS3ST3B1Q9Y662 390 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 AK5Q9Y6K8 562 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 CLIC1O00299 241 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 SOCS6O14544 535 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 EMC8O43402 210 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 OR10H2O60403 315 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 ANP32DO95626 131 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 CBX7O95931 251 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 IGHEP01854 428 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 IFNA16P05015 189 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 LIPCP11150 499 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 GPC1P35052 558 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 DLSTP36957 453 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 MAP3K8P41279 467 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 RASSF2P50749 326 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 GZMMP51124 257 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 OR4D2P58180 307 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 RPS18P62269 152 aaKnown RBP13.38□□□□□ -0.27
COL6A1-202ENST00000463060 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
COL6A1-202ENST00000463060 SSPNQ14714 243 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 SFT2D3Q587I9 215 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 RABL3Q5HYI8 236 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 FAAH2Q6GMR7 532 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 TMEM107Q6UX40 140 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 C16orf89Q6UX73 402 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 C6orf120Q7Z4R8 191 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 CPEB2Q7Z5Q1 589 aaKnown RBP13.38□□□□□ -0.27
COL6A1-202ENST00000463060 GALNT12Q8IXK2 581 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 DEFB107AQ8IZN7 70 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 C10orf111Q8N326 155 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 VWA5B2Q8N398 1253 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 TRIML2Q8N7C3 387 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF615Q8N8J6 731 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 DOK4Q8TEW6 326 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 HOXB13Q92826 284 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-202ENST00000463060 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-202ENST00000463060 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 TRIM8Q9BZR9 551 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 TPT1P8Q9HAU6 139 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 C3orf14Q9HBI5 128 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 PNO1Q9NRX1 252 aaKnown RBP13.38□□□□□ -0.27
COL6A1-202ENST00000463060 NDE1Q9NXR1 346 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 PADI2Q9Y2J8 665 aa13.38□□□□□ -0.27
COL6A1-202ENST00000463060 A8MUA0 341 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 C17orf105B2RV13 164 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 NME4O00746 187 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 GYG2O15488 501 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 GSC2O15499 205 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 FOLR3P41439 243 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 MAN2A2P49641 1150 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF267Q14586 743 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-202ENST00000463060 PCOLCEQ15113 449 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 PGM2L1Q6PCE3 622 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 KIRREL2Q6UWL6 708 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 PPP1R32Q7Z5V6 425 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 MORN4Q8NDC4 146 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 NUP43Q8NFH3 380 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 OR5AK3PQ8NH89 298 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 OR14A16Q8NHC5 309 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 MIPOL1Q8TD10 442 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF721Q8TF20 911 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 MOAP1Q96BY2 351 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 IMMP1LQ96LU5 166 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-202ENST00000463060 CADM1Q9BY67 442 aaKnown RBP13.37□□□□□ -0.27
COL6A1-202ENST00000463060 ZNF700Q9H0M5 742 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 SERHL2Q9H4I8 314 aa13.37□□□□□ -0.27
COL6A1-202ENST00000463060 KAT8Q9H7Z6 458 aaKnown RBP13.37□□□□□ -0.27
COL6A1-202ENST00000463060 ZCCHC3Q9NUD5 404 aaKnown RBP13.37□□□□□ -0.27
COL6A1-202ENST00000463060 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms