RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MLF1P58340 268 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MAD2L1Q13257 205 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MFAP5Q13361 173 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 PTGR1Q14914 329 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MEP1AQ16819 746 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MPEG1Q2M385 716 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 SLC9B1Q4ZJI4 515 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF385BQ569K4 471 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ACER2Q5QJU3 275 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 FCRLBQ6BAA4 426 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 FAM111BQ6SJ93 734 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 EPGNQ6UW88 154 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 HSDL2Q6YN16 418 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 LINC00696Q6ZRV3 163 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 FAM47EQ6ZV65 393 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 HPS6Q86YV9 775 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 RIMKLAQ8IXN7 391 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 SAMD14Q8IZD0 417 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-206ENST00000457035 LRRC25Q8N386 305 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ADCY4Q8NFM4 1077 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 OR8K3Q8NH51 312 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ACTRT2Q8TDY3 377 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MTERF3Q96E29 417 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 FBXL20Q96IG2 436 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ZNF354BQ96LW1 612 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 SLAMF7Q9NQ25 335 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MIEF1Q9NQG6 463 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 PLA2G3Q9NZ20 509 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 MAT2BQ9NZL9 334 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 NOP53Q9NZM5 478 aaKnown RBP9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ATP6V1HQ9UI12 483 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 ERVK-19Q9WJR5 959 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 EIF3LQ9Y262 564 aaKnown RBP9.34□□□□□ -0.91
ATG4A-206ENST00000457035 USH1CQ9Y6N9 552 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 SHANK1Q9Y566 2161 aa9.34□□□□□ -0.91
ATG4A-206ENST00000457035 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 GOLGA8QA0A0J9YX86 632 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 GOLGA8OA6NCC3 632 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 TCP11X1B4DZS4 312 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 GOLGA8NF8WBI6 632 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ANKRD28O15084 1053 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 DYRK3O43781 588 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 DPM1O60762 260 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 WISP1O95388 367 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 WDPCPO95876 746 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ALDOCP09972 364 aaKnown RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 NT5EP21589 574 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 SSTR4P31391 388 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 MPIP34949 423 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 PTGER1P34995 402 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 FRKP42685 505 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 C21orf58P58505 322 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 RNF4P78317 190 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 LTB4RQ15722 352 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 TRMT12Q53H54 448 aaKnown RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ZNF628Q5EBL2 1059 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ABHD17BQ5VST6 288 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ANKRD26P1Q6NSI1 321 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 C16orf47Q6ZP98 133 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 R3HCC1LQ7Z5L2 792 aaKnown RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 GALNT12Q8IXK2 581 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 C9orf40Q8IXQ3 194 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 LGI4Q8N135 537 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ZADH2Q8N4Q0 377 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 SLC5A8Q8N695 610 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 KRTCAP2Q8N6L1 136 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ZNF615Q8N8J6 731 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 SIMC1Q8NDZ2 872 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 CATSPER1Q8NEC5 780 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 OR7A2PQ8NGA2 310 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ZNF675Q8TD23 568 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 THAP3Q8WTV1 239 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 COQ8BQ96D53 544 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ART5Q96L15 291 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 OR52B2Q96RD2 323 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 CNPPD1Q9BV87 410 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 RNF32Q9H0A6 362 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 OR10A5Q9H207 317 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 GLIPR2Q9H4G4 154 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 LIN28AQ9H9Z2 209 aaKnown RBP9.33□□□□□ -0.92
ATG4A-206ENST00000457035 SH3BP4Q9P0V3 963 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 MYOTQ9UBF9 498 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 TEKT2Q9UIF3 430 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 CSAG2Q9Y5P2 127 aa9.33□□□□□ -0.92
ATG4A-206ENST00000457035 ESPL1Q14674 2120 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 ZNF407Q9C0G0 2248 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 POLEQ07864 2286 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 CYSRT1A8MQ03 144 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 CDK2AP1O14519 115 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 SCAMP2O15127 329 aaKnown RBP9.32□□□□□ -0.92
ATG4A-206ENST00000457035 PLOD3O60568 738 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 ZNF354AO60765 605 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-206ENST00000457035 EDF1O60869 148 aaKnown RBP9.32□□□□□ -0.92
ATG4A-206ENST00000457035 CBX7O95931 251 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 LAMP1P11279 417 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 PCSK2P16519 638 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 PRPS1L1P21108 318 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 CD96P40200 585 aa9.32□□□□□ -0.92
ATG4A-206ENST00000457035 IDH3AP50213 366 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms