RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NXF2Q9GZY0 626 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SP140LQ9H930 580 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 CPNE5Q9HCH3 593 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 ZCCHC3Q9NUD5 404 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 TAS2R16Q9NYV7 291 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 IFT52Q9Y366 437 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 A3GALT2U3KPV4 340 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 A0A1W2PR48 441 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 ZW10O43264 779 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 OR10H3O60404 316 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SLITRK5O94991 958 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 IGFBP1P08833 259 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 NR2F1P10589 423 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 PEBP1P30086 187 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 OLR1P78380 273 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SLAMF1Q13291 335 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 ZNF404Q494X3 552 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 TMEM201Q5SNT2 666 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 LYSMD2Q8IV50 215 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 FAM131CQ96AQ9 280 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC17A9Q9BYT1 436 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 OR51E2Q9H255 320 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 C11orf16Q9NQ32 467 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 TRPC4Q9UBN4 977 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 POU2F3Q9UKI9 436 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 KLK4Q9Y5K2 254 aa17.35■□□□□ 0.37
SEMA3B-209ENST00000456560 DOCK8Q8NF50 2099 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 A0A1W2PQU0 124 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 GLOD5A6NK44 160 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 DSCR3O14972 297 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 PGRMC2O15173 223 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ENTPD6O75354 484 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 TP53P04637 393 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 HIST1H1TP22492 207 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ATP5A1P25705 553 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 NTSP30990 170 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 AHRP35869 848 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 KIR2DL1P43626 348 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 KHKP50053 298 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ARFIP1P53367 373 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 UGT2B15P54855 530 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 KRT33BQ14525 404 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 GPR19Q15760 415 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 RPE65Q16518 533 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ITPRIPL2Q3MIP1 535 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ACOT4Q8N9L9 421 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 OR2L3Q8NG85 312 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 OR8K5Q8NH50 307 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 BBS10Q8TAM1 723 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 SUN3Q8TAQ9 357 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC7A13Q8TCU3 470 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 SFXN5Q8TD22 340 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 OR5M11Q96RB7 305 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 BBS4Q96RK4 519 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 GPSM3Q9Y4H4 160 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ATG4BQ9Y4P1 393 aa17.34■□□□□ 0.37
SEMA3B-209ENST00000456560 ISPDA4D126 451 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 PRR23AA6NEV1 266 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 ERI3O43414 337 aaKnown RBP17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 PLRG1O43660 514 aaKnown RBP17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 EPPINO95925 133 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 EIF2S1P05198 315 aaKnown RBP17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 GDI1P31150 447 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 DUSP2Q05923 314 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 PIN1Q13526 163 aaPredicted RBP17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 CARTPTQ16568 116 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 KIAA1211LQ6NV74 962 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 OLIG3Q7RTU3 272 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 KRT73Q86Y46 540 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 SLC7A5P1Q8MH63 180 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 FBXL6Q8N531 539 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 APOOQ9BUR5 198 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 SYNPO2LQ9H987 977 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 FBXL12Q9NXK8 326 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 SPHK1Q9NYA1 384 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 CES1P1Q9UKY3 287 aa17.33■□□□□ 0.37
SEMA3B-209ENST00000456560 MYO10Q9HD67 2058 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 A0A1W2PRQ8 180 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 K7EQS6 105 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 RNGTTO60942 597 aaKnown RBP17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 CHRM4P08173 479 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 PPP2R1BP30154 601 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 XKP51811 444 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 FUT5Q11128 374 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 DOC2BQ14184 412 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 SZRD1Q7Z422 152 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 AKAP14Q86UN6 197 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 KBTBD8Q8NFY9 601 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 OR2L5Q8NG80 312 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 CNRIP1Q96F85 164 aaPredicted RBP17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 SCARF2Q96GP6 870 aaPredicted RBP17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 IL4I1Q96RQ9 567 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 MYADMQ96S97 322 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 POLR2J3Q9H1A7 115 aaKnown RBP17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 IGFLR1Q9H665 355 aa17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 CCDC59Q9P031 241 aaKnown RBP17.33■□□□□ 0.36
SEMA3B-209ENST00000456560 MSRAQ9UJ68 235 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms