RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RNF4P78317 190 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 BIKQ13323 160 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 RNFT1Q5M7Z0 435 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 OPN5Q6U736 354 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 C3P1Q6ZMU1 363 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 RTL4Q6ZR62 310 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 GK5Q6ZS86 529 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 GOLGA7Q7Z5G4 137 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 TRPC4APQ8TEL6 797 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 RILPQ96NA2 401 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 MID1IP1Q9NPA3 183 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 LYARQ9NX58 379 aaKnown RBP20.06■□□□□ 0.8
C9orf3-208ENST00000451893 CLDN16Q9Y5I7 305 aa20.06■□□□□ 0.8
C9orf3-208ENST00000451893 AZIN1O14977 448 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 FGF17O60258 216 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 OR6B1O95007 311 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 SCELO95171 688 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 CLDN14O95500 239 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 P04436 131 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 STT3AP46977 705 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 CDH13P55290 713 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 ADORA2A-AS1P86434 159 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 TNFRSF17Q02223 184 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 SF3A3Q12874 501 aaKnown RBP eCLIP20.05■□□□□ 0.88e-10■■■□□ 16.8
C9orf3-208ENST00000451893 E2F2Q14209 437 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 FAM91A1Q658Y4 838 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 ACAD11Q709F0 780 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 CD163Q86VB7 1156 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 LURAP1LQ8IV03 231 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 MCEMP1Q8IX19 187 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 OR8K3Q8NH51 312 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 SLC22A8Q8TCC7 542 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 TANKQ92844 425 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 PELOQ9BRX2 385 aaKnown RBP20.05■□□□□ 0.8
C9orf3-208ENST00000451893 CNPPD1Q9BV87 410 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 TRIM33Q9UPN9 1127 aa20.05■□□□□ 0.8
C9orf3-208ENST00000451893 FAM166BA8MTA8 275 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 PLPP1O14494 284 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 UBFD1O14562 309 aaKnown RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 CLDN9O95484 217 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 CHEK2O96017 543 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 ENO1P06733 434 aaKnown RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 UROSP10746 265 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 AGAP20933 346 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 GRNP28799 593 aaKnown RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 PPIAP62937 165 aaKnown RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 FOLH1Q04609 750 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 PCDH1Q08174 1060 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 ZNF630Q2M218 657 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 C6orf163Q5TEZ5 329 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 ARHGAP11AQ6P4F7 1023 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 GPRIN3Q6ZVF9 776 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 SLC22A16Q86VW1 577 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 NUDT13Q86X67 352 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 ZNF321PQ8N8H1 164 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 ZFP62Q8NB50 900 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 C16orf52Q8NHV5 167 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 CA5BP1Q8WTZ4 195 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 ANKRD9Q96BM1 317 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 MTFMTQ96DP5 389 aaKnown RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 PHF12Q96QT6 1004 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 GAL3ST4Q96RP7 486 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 NTMT1Q9BV86 223 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 DEFB127Q9H1M4 99 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 NOL11Q9H8H0 719 aaKnown RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 SEMA4BQ9NPR2 832 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-208ENST00000451893 SACM1LQ9NTJ5 587 aa20.04■□□□□ 0.8
C9orf3-208ENST00000451893 LRRC14BA6NHZ5 514 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 E9PLN8 166 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 G3V3Y1 287 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 H0YIV9 168 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 DIAPH2O60879 1101 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 CRCPO75575 148 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 ATP5HO75947 161 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 NR2F6P10588 404 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 IRX1P78414 480 aaPredicted RBP20.03■□□□□ 0.8
C9orf3-208ENST00000451893 ZNF750Q32MQ0 723 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 KANK2Q63ZY3 851 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 C18orf63Q68DL7 685 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 SLC29A4Q7RTT9 530 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 MAVSQ7Z434 540 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 GDF7Q7Z4P5 450 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 MTDHQ86UE4 582 aaKnown RBP20.03■□□□□ 0.8
C9orf3-208ENST00000451893 DOLPP1Q86YN1 238 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 ZCCHC7Q8N3Z6 543 aaKnown RBP20.03■□□□□ 0.8
C9orf3-208ENST00000451893 FITM2Q8N6M3 262 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 OR2M7Q8NG81 312 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 FAM57AQ8TBR7 257 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 ACTRT2Q8TDY3 377 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 PPWD1Q96BP3 646 aaKnown RBP20.03■□□□□ 0.8
C9orf3-208ENST00000451893 NSUN5Q96P11 429 aaKnown RBP20.03■□□□□ 0.8
C9orf3-208ENST00000451893 VKORC1Q9BQB6 163 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 EXO5Q9H790 373 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 MEAF6Q9HAF1 191 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 ZBTB26Q9HCK0 441 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 RNF11Q9Y3C5 154 aa20.03■□□□□ 0.8
C9orf3-208ENST00000451893 CREBBPQ92793 2442 aa20.02■□□□□ 0.8
C9orf3-208ENST00000451893 ETHE1O95571 254 aa20.02■□□□□ 0.8
C9orf3-208ENST00000451893 SERPINB3P29508 390 aa20.02■□□□□ 0.8
C9orf3-208ENST00000451893 ARFIP1P53367 373 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms