RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TRIM45Q9H8W5 580 aaPredicted RBP16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 KLHL1Q9NR64 748 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 ASF1BQ9NVP2 202 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 HPF1Q9NWY4 346 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 TAS2R7Q9NYW3 318 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 MAT2BQ9NZL9 334 aa16.18■□□□□ 0.18
SMARCAL1-209ENST00000444508 C2orf92A0A1B0GVN3 265 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 PYCARD-AS1I3L0S3 204 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 SNNO75324 88 aaPredicted RBP16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 VPS4BO75351 444 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 RASAL1O95294 804 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 CLPSP04118 112 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 SP1P08047 785 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 PTGER1P34995 402 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 MAD2L1Q13257 205 aaPredicted RBP16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 EBPQ15125 230 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 LTB4RQ15722 352 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 CEBPEQ15744 281 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 SLC25A25Q6KCM7 469 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 FAM111BQ6SJ93 734 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 OPN5Q6U736 354 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF675Q8TD23 568 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 GFM2Q969S9 779 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 SCMH1Q96GD3 660 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 PPP1R36Q96LQ0 422 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 C1orf50Q9BV19 199 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 PNPOQ9NVS9 261 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 BCAP29Q9UHQ4 241 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 VPS4AQ9UN37 437 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 EIF3LQ9Y262 564 aaKnown RBP16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 CFL2Q9Y281 166 aa16.17■□□□□ 0.18
SMARCAL1-209ENST00000444508 MYO1GB0I1T2 1018 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 AKAP10O43572 662 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 BCAS2O75934 225 aaPredicted RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 SASH3O75995 380 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 OR6B1O95007 311 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 LRATO95237 230 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 JUNP05412 331 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 PRPS2P11908 318 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 DDX5P17844 614 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 HPCAL1P37235 193 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 SOX3P41225 446 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 NCBP2P52298 156 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 MGAT2Q10469 447 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 MAPKAPK3Q16644 382 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 PIGGQ5H8A4 983 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 IL23RQ5VWK5 629 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 IL20RBQ6UXL0 311 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 R3HCC1LQ7Z5L2 792 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 LIX1Q8N485 282 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 SLC15A4Q8N697 577 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 BCORP1Q8N888 145 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF615Q8N8J6 731 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 FAM98AQ8NCA5 519 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 OR9A2Q8NGT5 310 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 GRHL3Q8TE85 626 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 PPCDCQ96CD2 204 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 CTHRC1Q96CG8 243 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 ERP27Q96DN0 273 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF764Q96H86 408 aaPredicted RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 HES7Q9BYE0 225 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 REEP4Q9H6H4 257 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 TIMMDC1Q9NPL8 285 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 RYDENQ9NUL5 291 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 EXO1Q9UQ84 846 aaKnown RBP16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 NTNG1Q9Y2I2 539 aa16.16■□□□□ 0.18
SMARCAL1-209ENST00000444508 KLF11O14901 512 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 PDPK1O15530 556 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 NME2P1O60361 137 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 UBR5O95071 2799 aaPredicted RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 WISP1O95388 367 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 CRYABP02511 175 aaKnown RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 PCSK2P16519 638 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 S1PR1P21453 382 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 NME2P22392 152 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 RPL3P39023 403 aaKnown RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 PPP2R2AP63151 447 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 MRPS35P82673 323 aaKnown RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 EXOSC7Q15024 291 aaKnown RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 SMU1Q2TAY7 513 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 TRMT12Q53H54 448 aaKnown RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF628Q5EBL2 1059 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 GALNTL5Q7Z4T8 443 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 TAGAPQ8N103 731 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 GALNT11Q8NCW6 608 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 DYDC1Q8WWB3 177 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF75CPQ92670 426 aaPredicted RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 KAT2AQ92830 837 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 TP53INP1Q96A56 240 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 MTERF3Q96E29 417 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 NUF2Q9BZD4 464 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 AKTIPQ9H8T0 292 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 SH3BP4Q9P0V3 963 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 PRODH2Q9UF12 536 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 ZNF639Q9UID6 485 aa16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 KLF13Q9Y2Y9 288 aaPredicted RBP16.15■□□□□ 0.18
SMARCAL1-209ENST00000444508 UQCRHLA0A096LP55 91 aa16.14■□□□□ 0.17
SMARCAL1-209ENST00000444508 TBX19O60806 448 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms