RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 OR6C76A6NM76 312 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 LSM1O15116 133 aaKnown RBP20.17■□□□□ 0.82
TRAF4-205ENST00000444415 ITM2AO43736 263 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 LINC00032P0C843 101 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 CSNK2A2P19784 350 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-205ENST00000444415 RFC3P40938 356 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 MEOX1P50221 254 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 MRPS35P82673 323 aaKnown RBP20.17■□□□□ 0.82
TRAF4-205ENST00000444415 SH2D4BQ5SQS7 431 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 CHERPQ8IWX8 916 aaKnown RBP20.17■□□□□ 0.82
TRAF4-205ENST00000444415 LRRC25Q8N386 305 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-205ENST00000444415 VWA5B2Q8N398 1253 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 C16orf52Q8NHV5 167 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 FAM76AQ8TAV0 307 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 AGR3Q8TD06 166 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 EXOSC8Q96B26 276 aaKnown RBP20.17■□□□□ 0.82
TRAF4-205ENST00000444415 C20orf27Q9GZN8 174 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 ANKRA2Q9H9E1 313 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 MYNNQ9NPC7 610 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 GIMAP2Q9UG22 337 aa20.17■□□□□ 0.82
TRAF4-205ENST00000444415 DNAJC13O75165 2243 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 MYO7BQ6PIF6 2116 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 PIP5K1BO14986 540 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 PEX1O43933 1283 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 LYPLA1O75608 230 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-205ENST00000444415 CCL3P10147 92 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 PCSK2P16519 638 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 DDCP20711 480 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 SERPINB5P36952 375 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 NR0B1P51843 470 aaKnown RBP20.16■□□□□ 0.82
TRAF4-205ENST00000444415 HEPACAMQ14CZ8 416 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 EXOSC7Q15024 291 aaKnown RBP20.16■□□□□ 0.82
TRAF4-205ENST00000444415 RFTN2Q52LD8 501 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-205ENST00000444415 TRMT12Q53H54 448 aaKnown RBP20.16■□□□□ 0.82
TRAF4-205ENST00000444415 ZNF628Q5EBL2 1059 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 XKR7Q5GH72 579 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 FHL5Q5TD97 284 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 SLC29A4Q7RTT9 530 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 CCDC116Q8IYX3 515 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 CLYBLQ8N0X4 340 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 C3orf30Q96M34 536 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 BRINP2Q9C0B6 783 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 LRTM1Q9HBL6 345 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.16■□□□□ 0.827e-6■■■□□ 16.5
TRAF4-205ENST00000444415 C1orf109Q9NX04 203 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 EHD3Q9NZN3 535 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 ERVK-11Q9UQG0 969 aa20.16■□□□□ 0.82
TRAF4-205ENST00000444415 KLF13Q9Y2Y9 288 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-205ENST00000444415 WDR91A4D1P6 747 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 SLC28A1O00337 649 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 UNC5CO95185 931 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 GPX3P22352 226 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 GSTM5P46439 218 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 NUDCD3Q8IVD9 361 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 ZFP62Q8NB50 900 aaPredicted RBP20.15■□□□□ 0.82
TRAF4-205ENST00000444415 METTL2AQ96IZ6 378 aaKnown RBP20.15■□□□□ 0.82
TRAF4-205ENST00000444415 SLC35C2Q9NQQ7 365 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 PSME2Q9UL46 239 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 OSGIN2Q9Y236 505 aa20.15■□□□□ 0.82
TRAF4-205ENST00000444415 G3V3Y1 287 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 TM9SF1O15321 606 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 ZNHIT1O43257 154 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 SEC22BO75396 215 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 JUNP05412 331 aaKnown RBP20.14■□□□□ 0.81
TRAF4-205ENST00000444415 FBXO45P0C2W1 286 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 SDC1P18827 310 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 C2orf80Q0P641 193 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 OPN5Q6U736 354 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 TMEM64Q6YI46 380 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 RTL4Q6ZR62 310 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 TICAM1Q8IUC6 712 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 GOLM1Q8NBJ4 401 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 OR7G1Q8NGA0 311 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 OR9A2Q8NGT5 310 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 CDC26Q8NHZ8 85 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 ZNF675Q8TD23 568 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 SPACA9Q96E40 222 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-205ENST00000444415 GPR137Q96N19 417 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 PROK2Q9HC23 129 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 EML4Q9HC35 981 aaKnown RBP20.14■□□□□ 0.81
TRAF4-205ENST00000444415 TIMMDC1Q9NPL8 285 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 ZNF780BQ9Y6R6 833 aa20.14■□□□□ 0.81
TRAF4-205ENST00000444415 C2orf92A0A1B0GVN3 265 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 NPIPA5E9PKD4 350 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 RGS14O43566 566 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 NME6O75414 186 aaPredicted RBP20.13■□□□□ 0.81
TRAF4-205ENST00000444415 STSP08842 583 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 NEFHP12036 1026 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 ZNF24P17028 368 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 EMDP50402 254 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 RPL38P63173 70 aaKnown RBP20.13■□□□□ 0.81
TRAF4-205ENST00000444415 ALDH6A1Q02252 535 aaKnown RBP20.13■□□□□ 0.81
TRAF4-205ENST00000444415 ELOAQ14241 798 aaKnown RBP20.13■□□□□ 0.81
TRAF4-205ENST00000444415 CHI3L2Q15782 390 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 GFRALQ6UXV0 394 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 FGD2Q7Z6J4 655 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 OR2M7Q8NG81 312 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 PCNX1Q96RV3 2341 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 ITPAQ9BY32 194 aa20.13■□□□□ 0.81
TRAF4-205ENST00000444415 TAS2R7Q9NYW3 318 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms