RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MEN1O00255 615 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TXNDC9O14530 226 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TERTO14746 1132 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 LDLRP01130 860 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RAP2AP10114 183 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 UQCRC2P22695 453 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ATP5A1P25705 553 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FOXL2P58012 376 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HBA1P69905 142 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HYAL2Q12891 473 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 VMACQ2NL98 169 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 PRTGQ2VWP7 1150 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SPDYE7PQ495Y7 208 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 LRRC23Q53EV4 343 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GCNT6Q5T4J0 391 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SWT1Q5T5J6 900 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FAM69BQ5VUD6 431 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FAM198BQ6UWH4 519 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZNF793Q6ZN11 406 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TMEM151BQ8IW70 566 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MMP21Q8N119 569 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 EID3Q8N140 333 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 PAPD5Q8NDF8 572 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 OR52N2Q8NGI0 321 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NDC1Q9BTX1 674 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CUTCQ9NTM9 273 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GIMAP4Q9NUV9 329 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TEX10Q9NXF1 929 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 EHD3Q9NZN3 535 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NDOR1Q9UHB4 597 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RPS6KA6Q9UK32 745 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SAMD4AQ9UPU9 718 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ENTPD4Q9Y227 616 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MRPS2Q9Y399 296 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GMEB1Q9Y692 573 aa13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NUP214P35658 2090 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HYKKA2RU49 373 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SRPX2O60687 465 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SERPINA1P01009 418 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZNF888P0CJ79 500 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 BMP2P12643 396 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ALAS2P22557 587 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CERS1P27544 350 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DLSTP36957 453 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CRATP43155 626 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MANFP55145 182 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RAB8AP61006 207 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RPS18P62269 152 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 BTN3A2P78410 334 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DNASE1L3Q13609 305 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GRM7Q14831 915 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ATP6AP1Q15904 470 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MPEG1Q2M385 716 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TCTE1Q5JU00 501 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 NDUFAF5Q5TEU4 345 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RHBDD2Q6NTF9 364 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TTLL10Q6ZVT0 673 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ABHD13Q7L211 337 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GPR155Q7Z3F1 870 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ACOT4Q8N9L9 421 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 TTC29Q8NA56 475 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ZCCHC10Q8TBK6 192 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CENPNQ96H22 339 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 BTBD9Q96Q07 612 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CCNL2Q96S94 520 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 C9orf16Q9BUW7 83 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 AICDAQ9GZX7 198 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 MAGIXQ9H6Y5 334 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GPN2Q9H9Y4 310 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 C8orf4Q9NR00 106 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 AGPAT4Q9NRZ5 378 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 OLAHQ9NV23 265 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 PHF11Q9UIL8 331 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FBXW2Q9UKT8 454 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CNOT11Q9UKZ1 510 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 PADI1Q9ULC6 663 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FAF1Q9UNN5 650 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SNX8Q9Y5X2 465 aa13.67□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CACNA1GO43497 2377 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 SAC3D1A6NKF1 404 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 C4orf51C9J302 202 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CCNYL3P0C7X3 344 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GPC1P35052 558 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 PCGF2P35227 344 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RELAQ04206 551 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 HSPB3Q12988 150 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 FADDQ13158 208 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 RGNQ15493 299 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 COL28A1Q2UY09 1125 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.224e-6■■■□□ 16.5
TNFRSF1A-204ENST00000440083 BROXQ5VW32 411 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 CLEC4FQ8N1N0 589 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 C10orf111Q8N326 155 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
TNFRSF1A-204ENST00000440083 ARHGEF39Q8N4T4 335 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms