RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 GPR65Q8IYL9 337 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 OR8H2Q8N162 312 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 FAM26EQ8N5C1 309 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 OR2L2Q8NH16 312 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 SUN3Q8TAQ9 357 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 KLK6Q92876 244 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 TIMP4Q99727 224 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 B3GAT2Q9NPZ5 323 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 CCDC177Q9NQR7 707 aaPredicted RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 TVP23BQ9NYZ1 205 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 TAC3Q9UHF0 121 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 MAPRE3Q9UPY8 281 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 NTNG1Q9Y2I2 539 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 GPR52Q9Y2T5 361 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 ATG2AQ2TAZ0 1938 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 TFECO14948 347 aaPredicted RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 H1F0P07305 194 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 ALPPL2P10696 532 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 FABP5Q01469 135 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 ZNF155Q12901 538 aaPredicted RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 MLLT11Q13015 90 aaPredicted RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 ATAT1Q5SQI0 421 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 LCTLQ6UWM7 567 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 TRMT11Q7Z4G4 463 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 NRSN1Q8IZ57 195 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 ZFP41Q8N8Y5 198 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 PROKR2Q8NFJ6 384 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 OR5P2Q8WZ92 322 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 EXOSC8Q96B26 276 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 KATNB1Q9BVA0 655 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 POLR2J2Q9GZM3 115 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 RERGLQ9H628 205 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 EXOSC4Q9NPD3 245 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 MARK1Q9P0L2 795 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 MAFFQ9ULX9 164 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 SNX7Q9UNH6 387 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 MEIOCA2RUB1 952 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 FAAHO00519 579 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 NARSO43776 548 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 KRT8P05787 483 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 LIMS3P0CW19 117 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 LIMS4P0CW20 117 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 LAG3P18627 525 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 SDC2P34741 201 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 ALDH9A1P49189 494 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 ZNF628Q5EBL2 1059 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 DCST1Q5T197 706 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 MEDAGQ5VYS4 303 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 MRGPREQ86SM8 312 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 UBE2J2Q8N2K1 259 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 NLGN4YQ8NFZ3 816 aaPredicted RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 SMPDL3AQ92484 453 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 COX14Q96I36 57 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 NLNQ9BYT8 704 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 RACGAP1Q9H0H5 632 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 POLR2J3Q9H1A7 115 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 OR51I1Q9H343 314 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 C11orf49Q9H6J7 331 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 NPAP1Q9NZP6 1156 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 DIMT1Q9UNQ2 313 aaKnown RBP9.31□□□□□ -0.92
SS18-203ENST00000415083 MGAT4BQ9UQ53 548 aa9.31□□□□□ -0.92
SS18-203ENST00000415083 LAMA1P25391 3075 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 A0A0A6YYD5 115 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 B4DXG7 233 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 H7BY64 318 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 KIAA0355O15063 1070 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 RGS5O15539 181 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 FRS3O43559 492 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 IDH3BO43837 385 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 MPZL2O60487 215 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 TRIOO75962 3097 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 CXCL14O95715 111 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 RHOP08100 348 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 ACRP10323 421 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 MANFP55145 182 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 HNRNPA0Q13151 305 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 MLF2Q15773 248 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 C2orf16Q68DN1 1984 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 CD300LDQ6UXZ3 194 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 PRICKLE2Q7Z3G6 844 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 IL17RCQ8NAC3 791 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 FLCNQ8NFG4 579 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 ING5Q8WYH8 240 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 PRAP1Q96NZ9 151 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 TTYH2Q9BSA4 534 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 YIPF4Q9BSR8 244 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 BEX2Q9BXY8 128 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 POLDIP3Q9BY77 421 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 WASH6PQ9NQA3 447 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 MIEF1Q9NQG6 463 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 NDRG2Q9UN36 371 aaKnown RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 A0A1W2PQL4 384 aaPredicted RBP9.3□□□□□ -0.92
SS18-203ENST00000415083 A0A1W2PRQ8 180 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 ANKRD34BA5PLL1 514 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 GLOD5A6NK44 160 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 H3BN98 237 aa9.3□□□□□ -0.92
SS18-203ENST00000415083 QSOX1O00391 747 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms