RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 EID3Q8N140 333 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 LRRC25Q8N386 305 aaPredicted RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 VWA5B2Q8N398 1253 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 C16orf78Q8WTQ4 265 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 TP53INP1Q96A56 240 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 EXOSC8Q96B26 276 aaKnown RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 FAM111AQ96PZ2 611 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 TRMOQ9BU70 441 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 EBPLQ9BY08 206 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 EML4Q9HC35 981 aaKnown RBP10.35□□□□□ -0.75
RFFL-204ENST00000414419 DEPPQ9NTK1 212 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 ENTPD4Q9Y227 616 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 FIS1Q9Y3D6 152 aa10.35□□□□□ -0.75
RFFL-204ENST00000414419 EXPH5Q8NEV8 1989 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 FAM166BA8MTA8 275 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 SLC28A1O00337 649 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 AZIN1O14977 448 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 RGS14O43566 566 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 SEC22BO75396 215 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 RSL1D1O76021 490 aaKnown RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 PDE9AO76083 593 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 NADKO95544 446 aaPredicted RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 CLPSP04118 112 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CT62P0C5K7 136 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CCL3P10147 92 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 PTGER1P34995 402 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 PTGS2P35354 604 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 DNASE1L1P49184 302 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 KCNJ2P63252 427 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 RPP38P78345 283 aaKnown RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 RAE1P78406 368 aaKnown RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 HSF1Q00613 529 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 ZNF763Q0D2J5 394 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 C2orf80Q0P641 193 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 MAP4K2Q12851 820 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 C3AR1Q16581 482 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 PRICKLE4Q2TBC4 344 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 ZNF791Q3KP31 576 aaPredicted RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CLEC6AQ6EIG7 209 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 FAM180BQ6P0A1 224 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 FAM111BQ6SJ93 734 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 TRIM46Q7Z4K8 759 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CCDC116Q8IYX3 515 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 MREGQ8N565 214 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 ZNF615Q8N8J6 731 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 ADCY4Q8NFM4 1077 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 OR52N2Q8NGI0 321 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 OR5M3Q8NGP4 307 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 TCP10LQ8TDR4 215 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CNRIP1Q96F85 164 aaPredicted RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 BBS4Q96RK4 519 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 GATA5Q9BWX5 397 aaPredicted RBP10.34□□□□□ -0.75
RFFL-204ENST00000414419 TTTY12Q9BZ98 90 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 DEFB127Q9H1M4 99 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 MIEF1Q9NQG6 463 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 SIRT5Q9NXA8 310 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CNIH4Q9P003 139 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 SENP1Q9P0U3 644 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 SLC17A7Q9P2U7 560 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 HEY2Q9UBP5 337 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 TINAGQ9UJW2 476 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 ZNF835Q9Y2P0 537 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 NPFFR2Q9Y5X5 522 aa10.34□□□□□ -0.75
RFFL-204ENST00000414419 CACNA1DQ01668 2161 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 A0A1B0GTH9 108 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 PINLYPA6NC86 204 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 RGS16O15492 202 aaPredicted RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 NPHS1O60500 1241 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 BCAS2O75934 225 aaPredicted RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 TPOP07202 933 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 FBXO45P0C2W1 286 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 ALDH3A1P30838 453 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 MPIP34949 423 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 PIGAP37287 484 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 SMSP52788 366 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 EXOSC7Q15024 291 aaKnown RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 TRMT12Q53H54 448 aaKnown RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 CMPK2Q5EBM0 449 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 PRAMEF20Q5VT98 475 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 ARHGAP11AQ6P4F7 1023 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 Q6ZPB1 254 aaPredicted RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 FAM109AQ8N4B1 249 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 C17orf47Q8NEP4 570 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 OR10G3Q8NGC4 313 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 FAM76AQ8TAV0 307 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 PAQR8Q8TEZ7 354 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 DIO2Q92813 273 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 CCDC120Q96HB5 630 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 METTL2AQ96IZ6 378 aaKnown RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 JSRP1Q96MG2 331 aaPredicted RBP10.33□□□□□ -0.76
RFFL-204ENST00000414419 TMEM109Q9BVC6 243 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 CENPHQ9H3R5 247 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 LDAHQ9H6V9 325 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 EXO5Q9H790 373 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 IL1RL2Q9HB29 575 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 SLC35C2Q9NQQ7 365 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 MAT2BQ9NZL9 334 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 EHD3Q9NZN3 535 aa10.33□□□□□ -0.76
RFFL-204ENST00000414419 PRODH2Q9UF12 536 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms