RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 BAHCC1Q9P281 2608 aa5.92□□□□□ -1.46
USP54-202ENST00000413442 GCN1Q92616 2671 aaKnown RBP5.92□□□□□ -1.46
USP54-202ENST00000413442 MYO1GB0I1T2 1018 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 E9PLN8 166 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SLCO1B7G3V0H7 640 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 TGFBR3LH3BV60 316 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 LINC01387J3KSC0 135 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 PPP6CO00743 305 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 TYROBPO43914 113 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 COQ9O75208 318 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SEC22BO75396 215 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ERAL1O75616 437 aaKnown RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 LDLRP01130 860 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 IGHG3P01860 377 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 BPGMP07738 259 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ESRRAP11474 423 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 GABRA1P14867 456 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 S1PR1P21453 382 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 NT5EP21589 574 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 CA7P43166 264 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 PNLIPRP2P54317 469 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 PSMD4P55036 377 aaKnown RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 ERVK-8P63133 956 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 EEF1A1P68104 462 aaKnown RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 C2orf80Q0P641 193 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 EFR3AQ14156 821 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 PCLAFQ15004 111 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 KIAA0040Q15053 153 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 EBPQ15125 230 aaKnown RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 KRT71Q3SY84 523 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 VPS26BQ4G0F5 336 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 CYP27C1Q4G0S4 372 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SGO1Q5FBB7 561 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 EEF1A1P5Q5VTE0 462 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 FCRLBQ6BAA4 426 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 NOXRED1Q6NXP6 359 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SLC30A6Q6NXT4 461 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 MAMDC2Q7Z304 686 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 PACS2Q86VP3 889 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ZNF227Q86WZ6 799 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 NUDCD3Q8IVD9 361 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 C10orf107Q8IVU9 208 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 TRIM42Q8IWZ5 723 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 C4orf33Q8N1A6 199 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 FBXW8Q8N3Y1 598 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 KIF2BQ8N4N8 673 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ZNF808Q8N4W9 903 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 ZNF441Q8N8Z8 693 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 OR2M7Q8NG81 312 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 OR6Y1Q8NGX8 325 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ZFP28Q8NHY6 868 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 C16orf78Q8WTQ4 265 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ADIPOR1Q96A54 375 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SARAFQ96BY9 339 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 TMCO6Q96DC7 493 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SPACA9Q96E40 222 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 MAGED4Q96JG8 741 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 LCORQ96JN0 433 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 BBS4Q96RK4 519 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 VKORC1Q9BQB6 163 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 GATA5Q9BWX5 397 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 ANGPTL4Q9BY76 406 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ACPTQ9BZG2 426 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 CHST11Q9NPF2 352 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 KLHL1Q9NR64 748 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 SDHAF3Q9NRP4 125 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 FARSBQ9NSD9 589 aaKnown RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 ACSS1Q9NUB1 689 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 ATAD3AQ9NVI7 634 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 TEX10Q9NXF1 929 aaPredicted RBP5.91□□□□□ -1.46
USP54-202ENST00000413442 UTS2RQ9UKP6 389 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ERVK-19Q9WJR5 959 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 ENTPD4Q9Y227 616 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 OSGIN2Q9Y236 505 aa5.91□□□□□ -1.46
USP54-202ENST00000413442 FRG2CA6NGY1 282 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 OR6C70A6NIJ9 312 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 WWP2O00308 870 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 AQP7O14520 342 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 UBFD1O14562 309 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 TFECO14948 347 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 LRRTM2O43300 516 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SLC19A2O60779 497 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 WDR1O75083 606 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SH3BGRLO75368 114 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 CBR3O75828 277 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 GLSO94925 669 aaPredicted RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 UNC5CO95185 931 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ABOP16442 354 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 TSPAN8P19075 237 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ENDOUP21128 410 aaKnown RBP5.9□□□□□ -1.46
USP54-202ENST00000413442 ALDH3A1P30838 453 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 NTSP30990 170 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 PTGS2P35354 604 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 GCKP35557 465 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 KRT20P35900 424 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 PEX19P40855 299 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 SOX3P41225 446 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 ETV4P43268 484 aa5.9□□□□□ -1.46
USP54-202ENST00000413442 CLK3P49761 638 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms