RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 C7orf57Q8NEG2 295 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 OR5M3Q8NGP4 307 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 OR6Y1Q8NGX8 325 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 DNAJB8Q8NHS0 232 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 CLHC1Q8NHS4 586 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 NUBPLQ8TB37 319 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 TWIST2Q8WVJ9 160 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 KAT2AQ92830 837 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 PGM2Q96G03 612 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 PAIP2Q9BPZ3 127 aaKnown RBP12.15□□□□□ -0.46
SSB-203ENST00000413002 OR10A5Q9H207 317 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 LRTM1Q9HBL6 345 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 EML4Q9HC35 981 aaKnown RBP12.15□□□□□ -0.46
SSB-203ENST00000413002 TIMMDC1Q9NPL8 285 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 MAT2BQ9NZL9 334 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 SEC14L3Q9UDX4 400 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 BCAP29Q9UHQ4 241 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 PSME2Q9UL46 239 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 EXO1Q9UQ84 846 aaKnown RBP12.15□□□□□ -0.46
SSB-203ENST00000413002 DTX4Q9Y2E6 619 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 PCDHGB6Q9Y5F9 930 aa12.15□□□□□ -0.46
SSB-203ENST00000413002 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
SSB-203ENST00000413002 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 SVILO95425 2214 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 C2orf92A0A1B0GVN3 265 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 ATP6AP2A0A1C7CYW4 349 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 CLEC18AA5D8T8 446 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 ASPDHA6ND91 283 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 RGS14O43566 566 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 ATP6AP2O75787 350 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 CHEK2O96017 543 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 ATP1B1P05026 303 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 FGF4P08620 206 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 CCL3P10147 92 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 PCSK2P16519 638 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 BGNP21810 368 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 RPL38P63173 70 aaKnown RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 HSF1Q00613 529 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 ZNF763Q0D2J5 394 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 CHI3L2Q15782 390 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 MPEG1Q2M385 716 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 RFTN2Q52LD8 501 aaPredicted RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 C6orf163Q5TEZ5 329 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 FAM71E1Q6IPT2 247 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 ANKRD26P1Q6NSI1 321 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 OPN5Q6U736 354 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 LYPD8Q6UX82 237 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 CLEC18BQ6UXF7 455 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 PRR22Q8IZ63 422 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 LRRC25Q8N386 305 aaPredicted RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 VWA5B2Q8N398 1253 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 FAM98AQ8NCA5 519 aaKnown RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 CLEC18CQ8NCF0 446 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 OR9A2Q8NGT5 310 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 C16orf52Q8NHV5 167 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSB-203ENST00000413002 C3orf30Q96M34 536 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 SSU72Q9NP77 194 aaKnown RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 SLC35C2Q9NQQ7 365 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSB-203ENST00000413002 C1orf109Q9NX04 203 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 SIRT5Q9NXA8 310 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 BAIAP2L1Q9UHR4 511 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 SH3BGRL2Q9UJC5 107 aa12.14□□□□□ -0.47
SSB-203ENST00000413002 ERRFI1Q9UJM3 462 aaPredicted RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 KLF13Q9Y2Y9 288 aaPredicted RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 ASH1LQ9NR48 2969 aaKnown RBP12.14□□□□□ -0.47
SSB-203ENST00000413002 KLRC4-KLRK1H3BQV0 150 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 LSM1O15116 133 aaKnown RBP12.13□□□□□ -0.47
SSB-203ENST00000413002 AKAP10O43572 662 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 HS6ST1O60243 411 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 PEX11AO75192 247 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 HSPA4LO95757 839 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 CBX7O95931 251 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 JUNP05412 331 aaKnown RBP12.13□□□□□ -0.47
SSB-203ENST00000413002 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 ZNF24P17028 368 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 DDCP20711 480 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 PIGAP37287 484 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 DNASE1L1P49184 302 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 MAP4K2Q12851 820 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 ZNF791Q3KP31 576 aaPredicted RBP12.13□□□□□ -0.47
SSB-203ENST00000413002 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 C1QL3Q5VWW1 255 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 HLA-DQA1Q5Y7H0 255 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 RTL4Q6ZR62 310 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 SIAH3Q8IW03 269 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 OR52R1Q8NGF1 315 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 SLC22A8Q8TCC7 542 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 MGARPQ8TDB4 240 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 PPP1R36Q96LQ0 422 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 TSSK3Q96PN8 268 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 BBS4Q96RK4 519 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 ITPAQ9BY32 194 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 C20orf27Q9GZN8 174 aa12.13□□□□□ -0.47
SSB-203ENST00000413002 MYNNQ9NPC7 610 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms