RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 CORO2BQ9UQ03 480 aa12.63□□□□□ -0.39
LIMS1-204ENST00000409441 MSRB2Q9Y3D2 182 aa12.63□□□□□ -0.39
LIMS1-204ENST00000409441 MAU2Q9Y6X3 613 aa12.63□□□□□ -0.39
LIMS1-204ENST00000409441 H0YIG0 161 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 CLIC1O00299 241 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PLOD2O00469 737 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PCDH7O60245 1069 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 DNAJB6O75190 326 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 DXOO77932 396 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 GBAP04062 536 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 GSNP06396 782 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 KLK1P06870 262 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 KLK3P07288 261 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 FESP07332 822 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ADRB1P08588 477 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZNF10P21506 573 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 HIST1H1TP22492 207 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SSR2P43308 183 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 DCDP81605 110 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 EPS8Q12929 822 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 CPTPQ5TA50 214 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 CPZQ66K79 652 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 NIPAL1Q6NVV3 410 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ENPP6Q6UWR7 440 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 C6orf15Q6UXA7 325 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZNF793Q6ZN11 406 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 GPR155Q7Z3F1 870 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 COMMD6Q7Z4G1 85 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ACOT4Q8N9L9 421 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 FAM47BQ8NA70 645 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 MAGEE2Q8TD90 523 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 GFM2Q969S9 779 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TMBIM1Q969X1 311 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 COL26A1Q96A83 441 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SERINC2Q96SA4 455 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 YTHDF1Q9BYJ9 559 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 DDX31Q9H8H2 851 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 AKIRIN1Q9H9L7 192 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 USE1Q9NZ43 259 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SAMD4AQ9UPU9 718 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TMEM184BQ9Y519 407 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TEX51A0A1B0GUA7 166 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZNF860A6NHJ4 632 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 B3GALT2O43825 422 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 BRINP1O60477 761 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PRKD3O94806 890 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SERPINA1P01009 418 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 CCNYL3P0C7X3 344 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 AGXTP21549 392 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SKP1P63208 163 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ADARB1P78563 741 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZNF763Q0D2J5 394 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SLAMF1Q13291 335 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 RUNX2Q13950 521 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 NKAIN1Q4KMZ8 207 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 CCNYL2Q5T2Q4 361 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZNF385CQ66K41 422 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PAGE2Q7Z2X7 111 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TIPARPQ7Z3E1 657 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 R3HCC1LQ7Z5L2 792 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PATL1Q86TB9 770 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 SATL1Q86VE3 508 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZDHHC13Q8IUH4 622 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZCCHC7Q8N3Z6 543 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 OR5T3Q8NGG3 340 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ZFP28Q8NHY6 868 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TBC1D20Q96BZ9 403 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 DGCR14Q96DF8 476 aaKnown RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PYURFQ96I23 114 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 BHLHE41Q9C0J9 482 aaPredicted RBP12.62□□□□□ -0.39
LIMS1-204ENST00000409441 THSD1Q9NS62 852 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 ADAM29Q9UKF5 820 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 PADI1Q9ULC6 663 aa12.62□□□□□ -0.39
LIMS1-204ENST00000409441 TRIM64A6NGJ6 449 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 RNASET2O00584 256 aaKnown RBP12.61□□□□□ -0.39
LIMS1-204ENST00000409441 CHST10O43529 356 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 RDH16O75452 317 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 DLGAP3O95886 979 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 ONECUT2O95948 504 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 CST1P01037 141 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 ALBP02768 609 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 MT-ND1P03886 318 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 LAMP1P11279 417 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 CERS1P27544 350 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 OLR1P78380 273 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 NKG7Q16617 165 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 VMACQ2NL98 169 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 CYBRD1Q53TN4 286 aa12.61□□□□□ -0.39
LIMS1-204ENST00000409441 LCN10Q6JVE6 187 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms