RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KBTBD12Q3ZCT8 623 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 VASNQ6EMK4 673 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CYP20A1Q6UW02 462 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ZNF662Q6ZS27 426 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 GPR180Q86V85 440 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ZNF321PQ8N8H1 164 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 MBD3L2Q8NHZ7 208 aaPredicted RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 ZPLD1Q8TCW7 415 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CDKL2Q92772 493 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 RHBDF1Q96CC6 855 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 REPS1Q96D71 796 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CCL19Q99731 98 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 SMR3AQ99954 134 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 MAPKAP1Q9BPZ7 522 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ERVK-6Q9BXR3 956 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 WWTR1Q9GZV5 400 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 METTL7AQ9H8H3 244 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 PLEKHF2Q9H8W4 249 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 FANCFQ9NPI8 374 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 PRDM7Q9NQW5 492 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 TPSG1Q9NRR2 321 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 LYARQ9NX58 379 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 PTBP2Q9UKA9 531 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 CHMP2BQ9UQN3 213 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 ERVK-19Q9WJR5 959 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 C15orf41Q9Y2V0 281 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 JRKLQ9Y4A0 524 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 CLDN16Q9Y5I7 305 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 IKBKGQ9Y6K9 419 aa7.09□□□□□ -1.27
LSM5-202ENST00000409292 FLNAP21333 2647 aaKnown RBP7.09□□□□□ -1.27
LSM5-202ENST00000409292 HIVEP2P31629 2446 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ARHGAP21Q5T5U3 1957 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 LRRC3CA6NJW4 275 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 H7C1Q1 480 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 DNALI1O14645 258 aaPredicted RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 FGF17O60258 216 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 SCELO95171 688 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ACSL3O95573 720 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 GPR75O95800 540 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 TGFB1P01137 390 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 IFNA2P01563 188 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 IGKV3-11P04433 115 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 CD53P19397 219 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 GALNSP34059 522 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 GGT5P36269 586 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 CPOXP36551 454 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 HSPA7P48741 367 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 AGFG1P52594 562 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 ARFIP1P53367 373 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ARL4CP56559 192 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 RPS13P62277 151 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 POU4F1Q01851 419 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 TNFRSF17Q02223 184 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 CHIT1Q13231 466 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 DDX39BQ13838 428 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 FGFBP1Q14512 234 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 MORF4L2Q15014 288 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 CYP1B1Q16678 543 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 SPRED3Q2MJR0 410 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 NHSL2Q5HYW2 709 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 RNASEH2BQ5TBB1 312 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 KHDRBS2Q5VWX1 349 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 OR4C11Q6IEV9 310 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 OR2A2Q6IF42 318 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 TTC27Q6P3X3 843 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 AAGABQ6PD74 315 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 SEM1Q6ZVN7 128 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 LRRC70Q7Z2Q7 622 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 YTHDF3Q7Z739 585 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 LUZP2Q86TE4 346 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 MYLK4Q86YV6 388 aaPredicted RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 OR4N5Q8IXE1 308 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 C9orf40Q8IXQ3 194 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ZNF441Q8N8Z8 693 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 NAXEQ8NCW5 288 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 OR1J4Q8NGS1 313 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 OR14L1PQ8NHC6 308 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ANKRD9Q96BM1 317 aaPredicted RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 PPWD1Q96BP3 646 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 ARSGQ96EG1 525 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 WDR34Q96EX3 536 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 COX4I2Q96KJ9 171 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 Q96MF0 132 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 RILPQ96NA2 401 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 MS4A8Q9BY19 250 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ANGPTL4Q9BY76 406 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 DERL2Q9GZP9 239 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 ACTR8Q9H981 624 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 SH2D2AQ9NP31 389 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 TEX10Q9NXF1 929 aaPredicted RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 PACSIN3Q9UKS6 424 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 CNOT11Q9UKZ1 510 aaKnown RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 RNF112Q9ULX5 631 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 NPFFR2Q9Y5X5 522 aa7.08□□□□□ -1.28
LSM5-202ENST00000409292 CHCHD2Q9Y6H1 151 aaPredicted RBP7.08□□□□□ -1.28
LSM5-202ENST00000409292 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms