RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 FBXL20Q96IG2 436 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 ZNF845Q96IR2 970 aaPredicted RBP8.37□□□□□ -1.07
NUP43-204ENST00000403890 DGAT2Q96PD7 388 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 TRIM54Q9BYV2 358 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 REXO4Q9GZR2 422 aaKnown RBP8.37□□□□□ -1.07
NUP43-204ENST00000403890 WWTR1Q9GZV5 400 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 LYRM4Q9HD34 91 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 ABHD10Q9NUJ1 306 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 PTBP2Q9UKA9 531 aaKnown RBP8.37□□□□□ -1.07
NUP43-204ENST00000403890 RNF112Q9ULX5 631 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 COMMD10Q9Y6G5 202 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 KCNE2Q9Y6J6 123 aa8.37□□□□□ -1.07
NUP43-204ENST00000403890 IGHV4-30-2A0A087WSY4 118 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 FAM234BA2RU67 622 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 HRKO00198 91 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 CDC7O00311 574 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 OR10H2O60403 315 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 NDUFS7O75251 213 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 H2AFYO75367 372 aaKnown RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 IPO7O95373 1038 aaKnown RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 CGAP01215 116 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 F7P08709 466 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 DANCRP0C864 163 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 CD8BP10966 210 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 MGAT1P26572 445 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 CERS1P27544 350 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 STARP49675 285 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 LOXL1Q08397 574 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 BIKQ13323 160 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 SQLEQ14534 574 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 KBTBD12Q3ZCT8 623 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 SBSNQ6UWP8 590 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 CHMP1BQ7LBR1 199 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 PRUNE1Q86TP1 453 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 DENND6AQ8IWF6 608 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 MYO1HQ8N1T3 1032 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 OR2L5Q8NG80 312 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 OR14L1PQ8NHC6 308 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 SMAP2Q8WU79 429 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 ATG4AQ8WYN0 398 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 FBXW5Q969U6 566 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 PPWD1Q96BP3 646 aaKnown RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 FBXL8Q96CD0 374 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 ZMYND19Q96E35 227 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 COPS7BQ9H9Q2 264 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 FBXO6Q9NRD1 293 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 SYBUQ9NX95 663 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 TRMT6Q9UJA5 497 aaKnown RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 TFR2Q9UP52 801 aa8.36□□□□□ -1.07
NUP43-204ENST00000403890 MAGED1Q9Y5V3 778 aaPredicted RBP8.36□□□□□ -1.07
NUP43-204ENST00000403890 MALRD1Q5VYJ5 2156 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 A0A0G2JK05 382 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 TCRBV7S2A1N4TA0A589 114 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SLC22A20A6NK97 555 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 OR6C76A6NM76 312 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 EMC8O43402 210 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 HCRTR2O43614 444 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SSX4O60224 188 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 GUCA1CO95843 209 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 ARAFP10398 606 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 ETS1P14921 441 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 HNF1AP20823 631 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 GSTM2P28161 218 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 TMED10P49755 219 aaKnown RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 LHX2P50458 406 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SLC37A1P57057 533 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SIRPAP78324 504 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 IGLV3-21P80748 117 aaPredicted RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 TGM3Q08188 693 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 FAPQ12884 760 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 THOC5Q13769 683 aaKnown RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 FGFBP1Q14512 234 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SETDB1Q15047 1291 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 EBPQ15125 230 aaKnown RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 OASLQ15646 514 aaKnown RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 ADPRMQ3LIE5 342 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 FAM120AOSQ5T036 256 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 ABHD17CQ6PCB6 329 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 AAGABQ6PD74 315 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 ANGPTL8Q6UXH0 198 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 TMIGD1Q6UXZ0 262 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 RNF111Q6ZNA4 994 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 C1orf229Q6ZS94 237 aaPredicted RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 THOC6Q86W42 341 aaKnown RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 VSTM4Q8IW00 320 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 OR4N5Q8IXE1 308 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 CCDC89Q8N998 374 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 OR10H5Q8NGA6 315 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 LILRB1Q8NHL6 650 aaPredicted RBP8.35□□□□□ -1.07
NUP43-204ENST00000403890 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 TSGA10Q9BZW7 698 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 L2HGDHQ9H9P8 463 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 PRDM7Q9NQW5 492 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SNX15Q9NRS6 342 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 PAK5Q9P286 719 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 HEY2Q9UBP5 337 aa8.35□□□□□ -1.07
NUP43-204ENST00000403890 SLC22A14Q9Y267 594 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms