RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 RBMXL3Q8N7X1 1067 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 CCDC71LQ8N9Z2 235 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 SUMF2Q8NBJ7 301 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ECHDC3Q96DC8 303 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 TCEAL2Q9H3H9 227 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 PAQR5Q9NXK6 330 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 RNF11Q9Y3C5 154 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 PCDHAC2Q9Y5I4 1007 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 RCCD1A6NED2 376 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 UBFD1O14562 309 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 TRAF3IP2O43734 574 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 MT-ND2P03891 347 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 C8BP07358 591 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 LMO2P25791 158 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 HERVK_113P63132 956 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 RCAN2Q14206 197 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 PLPPR4Q7Z2D5 763 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 GRASPQ7Z6J2 395 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 FAM217AQ8IXS0 508 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 POTEKPQ9BYX7 375 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 WWTR1Q9GZV5 400 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 TCRBV7S2A1N4TA0A589 114 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 VSTM2BA6NLU5 285 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 UPK3BL1B0FP48 263 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 UPK3BL2E5RIL1 263 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 SERPINA5P05154 406 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 DCNP07585 359 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 GPR4P46093 362 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 NKX2-5P52952 324 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 TDGQ13569 410 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 CYBRD1Q53TN4 286 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 FJX1Q86VR8 437 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 CLEC4CQ8WTT0 213 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ISOC1Q96CN7 298 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ZNF514Q96K75 400 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 HDHD5Q9BXW7 423 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 USP36Q9P275 1121 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 EXOSC1Q9Y3B2 195 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 ATG4BQ9Y4P1 393 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 NCANO14594 1321 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 H3BML4 177 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 EOMESO95936 686 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 TAP2Q03519 686 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 DPY19L1Q2PZI1 675 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ZNF776Q68DI1 518 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 TMEM107Q6UX40 140 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 TMEM104Q8NE00 496 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 IL31RAQ8NI17 732 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 PAQR8Q8TEZ7 354 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 HHIPL1Q96JK4 782 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 PDE7BQ9NP56 450 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 KDM5CP41229 1560 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 UNC119BA6NIH7 251 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 TMEM88BA6NKF7 163 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ZNF891A8MT65 544 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 NPHS1O60500 1241 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ABCB7O75027 752 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 PPP5CP53041 499 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 RPS18P62269 152 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 FGL2Q14314 439 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 FBXO43Q4G163 708 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 IL20RBQ6UXL0 311 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 SLC5A11Q8WWX8 675 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 INTS12Q96CB8 462 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 SENP5Q96HI0 755 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 SLC2A4RGQ9NR83 387 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 DLGAP4Q9Y2H0 992 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ZNF821O75541 412 aaPredicted RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 NXPH3O95157 252 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 IL7P13232 177 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 CREB1P16220 341 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 SNTB2Q13425 540 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 LEG1Q6P5S2 330 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 YTHDF3Q7Z739 585 aaKnown RBP11.81□□□□□ -0.52
SMU1-201ENST00000397149 SMPDL3AQ92484 453 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 ACKR4Q9NPB9 350 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 KCNJ16Q9NPI9 418 aa11.81□□□□□ -0.52
SMU1-201ENST00000397149 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 CDK1P06493 297 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 GKP32189 559 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 FAM26DQ5JW98 314 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 ZNF767PQ75MW2 155 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 VSIG10LQ86VR7 867 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 UEVLDQ8IX04 471 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 RDH10Q8IZV5 341 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 MYLIPQ8WY64 445 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 FUBP3Q96I24 572 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMU1-201ENST00000397149 FBXL18Q96ME1 805 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 STUB1Q9UNE7 303 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 CREG1O75629 220 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 GRB7Q14451 532 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 DMBX1Q8NFW5 382 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 OR4F6Q8NGB9 312 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 NTAN1Q96AB6 310 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 CCDC74BQ96LY2 380 aa11.8□□□□□ -0.52
SMU1-201ENST00000397149 CGREF1Q99674 301 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms