RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 OCRLQ01968 901 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 LTB4RQ15722 352 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 MPEG1Q2M385 716 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 PIGGQ5H8A4 983 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 HLA-DQA1Q5Y7H0 255 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 R3HCC1LQ7Z5L2 792 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 GPALPP1Q8IXQ4 340 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF615Q8N8J6 731 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 MDS2Q8NDY4 140 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF675Q8TD23 568 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 LRRC8CQ8TDW0 803 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 ASB15Q8WXK1 588 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 TMEM125Q96AQ2 219 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 MTERF3Q96E29 417 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 C5orf34Q96MH7 638 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 RASL10BQ96S79 203 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 C1orf50Q9BV19 199 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 WWTR1Q9GZV5 400 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 INTS9Q9NV88 658 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 SH3BP4Q9P0V3 963 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 BCAP29Q9UHQ4 241 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF639Q9UID6 485 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 CFL2Q9Y281 166 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 PCDHGB6Q9Y5F9 930 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 C2orf92A0A1B0GVN3 265 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 A8MVJ9 347 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 HDAC3O15379 428 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 TBX19O60806 448 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 BCAS2O75934 225 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 NEURL1O76050 574 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 CLPSP04118 112 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 KITP10721 976 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 PLA2G2AP14555 144 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 PTGER1P34995 402 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 RPL3P39023 403 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 NCBP2P52298 156 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■□□□□ 8.3
PDLIM7-204ENST00000393546 PRSS53Q2L4Q9 553 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 TRMT12Q53H54 448 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 SLC25A25Q6KCM7 469 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 OPN5Q6U736 354 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 FAM9CQ8IZT9 166 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 SLC15A4Q8N697 577 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 TMEM178AQ8NBL3 297 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 SLC22A8Q8TCC7 542 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 PPCDCQ96CD2 204 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 CTHRC1Q96CG8 243 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 SNRNP40Q96DI7 357 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 ERP27Q96DN0 273 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF764Q96H86 408 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 GAL3ST4Q96RP7 486 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 MEAF6Q9HAF1 191 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 RYDENQ9NUL5 291 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 HPF1Q9NWY4 346 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 NOP53Q9NZM5 478 aaKnown RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 MARCOQ9UEW3 520 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 ERVK-11Q9UQG0 969 aa17.6■□□□□ 0.41
PDLIM7-204ENST00000393546 TRPC5OSA6NMA1 111 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 SP1P08047 785 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 PCSK2P16519 638 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 HPCAL1P37235 193 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 EBPQ15125 230 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 INAQ16352 499 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF628Q5EBL2 1059 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 IL20RBQ6UXL0 311 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 WDR75Q8IWA0 830 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 LRRC34Q8IZ02 419 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 CYP4Z2PQ8N1L4 340 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 OR9A2Q8NGT5 310 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 KAT2AQ92830 837 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 TP53INP1Q96A56 240 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 TRIM4Q9C037 500 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 KLHL1Q9NR64 748 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 PRODH2Q9UF12 536 aa17.59■□□□□ 0.41
PDLIM7-204ENST00000393546 J3QKU1 62 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 PDPK1O15530 556 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 SLC25A12O75746 678 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 OR6B1O95007 311 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 RASAL1O95294 804 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 CBX7O95931 251 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 G6PDP11413 515 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 LBPP18428 481 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 SOX3P41225 446 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 MRPS35P82673 323 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 PDE7AQ13946 482 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 EXOSC7Q15024 291 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 MAPKAPK3Q16644 382 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 PRR30Q53SZ7 412 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 ANKRD26P1Q6NSI1 321 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 TAGAPQ8N103 731 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 OR52R1Q8NGF1 315 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 C16orf52Q8NHV5 167 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 PIWIL2Q8TC59 973 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 SCMH1Q96GD3 660 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 AMDHD1Q96NU7 426 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 PRPF18Q99633 342 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 GLIPR2Q9H4G4 154 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 AGPAT4Q9NRZ5 378 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 ASIC5Q9NY37 505 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 ATP6V1HQ9UI12 483 aa17.58■□□□□ 0.4
PDLIM7-204ENST00000393546 PLOD3O60568 738 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms