RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 OR4M2Q8NGB6 313 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 TCEAL7Q9BRU2 100 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 RBCK1Q9BYM8 510 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 HEBP1Q9NRV9 189 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 TEX10Q9NXF1 929 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 KLK4Q9Y5K2 254 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 RPS17P08708 135 aaKnown RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 ADH6P28332 368 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 SEC13P55735 322 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 ESCO2Q56NI9 601 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 CPZQ66K79 652 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 METAP1DQ6UB28 335 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 GPR149Q86SP6 731 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF101Q8IZC7 436 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 FANK1Q8TC84 345 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 SELENOWP63302 87 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 GAS6Q14393 721 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 CES4AQ5XG92 561 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 GDPD4Q6W3E5 623 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 CIDECQ96AQ7 238 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 CCDC120Q96HB5 630 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 RIOK2Q9BVS4 552 aaKnown RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 FARSAQ9Y285 508 aaKnown RBP18.8■□□□□ 0.6
SHANK1-203ENST00000391813 HEBP2Q9Y5Z4 205 aa18.8■□□□□ 0.6
SHANK1-203ENST00000391813 TLX3O43711 291 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-203ENST00000391813 TRAPPC2P0DI81 140 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 TRAPPC2BP0DI82 140 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 AHCYP23526 432 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 SHMT2P34897 504 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 GATMP50440 423 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 CDK10Q15131 360 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 TEAD2Q15562 447 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 DCAF4L2Q8NA75 395 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 GRHL3Q8TE85 626 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 MZB1Q8WU39 189 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 SLC22A18Q96BI1 424 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 ANKRD34BA5PLL1 514 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 UCHL1P09936 223 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 CYP27C1Q4G0S4 372 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 TOR1AIP1Q5JTV8 583 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 NKAPLQ5M9Q1 402 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 FAM217AQ8IXS0 508 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 GTPBP8Q8N3Z3 284 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-203ENST00000391813 ZCCHC10Q8TBK6 192 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 NECAB3Q96P71 396 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-203ENST00000391813 OR2M2Q96R28 347 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 ACSL6Q9UKU0 697 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 BEST1O76090 585 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 GK2Q14410 553 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-203ENST00000391813 FOXRED2Q8IWF2 684 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 B3GNT7Q8NFL0 401 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF300Q96RE9 604 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-203ENST00000391813 P2RY13Q9BPV8 354 aa18.79■□□□□ 0.6
SHANK1-203ENST00000391813 ICMTO60725 284 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 UBXN7O94888 489 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 GBAP04062 536 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 NDUFV2P19404 249 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 TAZQ16635 292 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 INAVAQ3KP66 663 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF648Q5T619 568 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-203ENST00000391813 ELP2Q6IA86 826 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 C14orf80Q86SX3 495 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 ARL11Q969Q4 196 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 C7orf34Q96L11 122 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 OR10A4Q9H209 315 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 RANGRFQ9HD47 186 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-203ENST00000391813 KCNN3Q9UGI6 736 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 KRBOX1C9JBD0 128 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 CTDSP2O14595 271 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 SOCS5O75159 536 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 SFRP4Q6FHJ7 346 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-203ENST00000391813 SLC8B1Q6J4K2 584 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 CADM3Q8N126 398 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 C7orf57Q8NEG2 295 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 EDDM13A0A1B0GTR0 161 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 CD68P34810 354 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-203ENST00000391813 GXYLT1Q4G148 440 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 FAM69AQ5T7M9 428 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 ZNF584Q8IVC4 421 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 CNTN4Q8IWV2 1026 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 ARFGAP1Q8N6T3 406 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 OR4K5Q8NGD3 323 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 SUN3Q8TAQ9 357 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 CTRCQ99895 268 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 BIN3Q9NQY0 253 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 PDE4DIPQ5VU43 2346 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 SCAMP2O15127 329 aaKnown RBP18.78■□□□□ 0.6
SHANK1-203ENST00000391813 MTX2O75431 263 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 MLLT1Q03111 559 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-203ENST00000391813 GRIN2CQ14957 1233 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 GTDC1Q4AE62 458 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 C2orf27AQ580R0 203 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 NPWQ8N729 165 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 OR5T3Q8NGG3 340 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 OR9A1PQ8NGU1 263 aa18.78■□□□□ 0.6
SHANK1-203ENST00000391813 TEX13DA0A0J9YY54 714 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-203ENST00000391813 F8W036 122 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 MEN1O00255 615 aa18.77■□□□□ 0.6
SHANK1-203ENST00000391813 EIF3FO00303 357 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-203ENST00000391813 ALX3O95076 343 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms