RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ZDHHC14Q8IZN3 488 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 Q8N9G6 341 aaPredicted RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 ZNF486Q96H40 463 aaPredicted RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 NSUN5Q96P11 429 aaKnown RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 TRIB3Q96RU7 358 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 CACNG6Q9BXT2 260 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 ACTL8Q9H568 366 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 ZNF701M0R085 212 aaPredicted RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 TGM5O43548 720 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 LILRB3O75022 631 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 RHCEP18577 417 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 POU4F2Q12837 409 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 ZNF805Q5CZA5 627 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 VWA5B2Q8N398 1253 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 OR56A3Q8NH54 315 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 PHOSPHO1Q8TCT1 267 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 PRR11Q96HE9 360 aaPredicted RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 KATNBL1Q9H079 304 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 NLKQ9UBE8 527 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 MSL3P1P0C860 447 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 GGT1P19440 569 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 KCNJ5P48544 419 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 ABRAXAS2Q15018 415 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 GLS2Q9UI32 602 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 GJB5O95377 273 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 PAK4O96013 591 aaPredicted RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 CAPN3P20807 821 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 ARL3P36405 182 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 SNRPD2P62316 118 aaKnown RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 DCUN1D3Q8IWE4 304 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 CHDHQ8NE62 594 aaPredicted RBP13.36□□□□□ -0.27
SNPH-201ENST00000381867 ASB15Q8WXK1 588 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 GDE1Q9NZC3 331 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 NDUFAF4Q9P032 175 aa13.36□□□□□ -0.27
SNPH-201ENST00000381867 SNNO75324 88 aaPredicted RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 STATHP02808 62 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 RAB8AP61006 207 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 GAS6Q14393 721 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 TSPYL5Q86VY4 417 aaPredicted RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 FTMTQ8N4E7 242 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 THAP4Q8WY91 577 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ACSL6Q9UKU0 697 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 SARDHQ9UL12 918 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 OARD1Q9Y530 152 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 CFAP20Q9Y6A4 193 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 XIRP1Q702N8 1843 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 GRXCR1A8MXD5 290 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 H3BMQ9 156 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 PDYNP01213 254 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 SLC35E2BP0CK96 405 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 GPRC6AQ5T6X5 926 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 CYS1Q717R9 158 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 TMPRSS12Q86WS5 348 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 OR6C4Q8NGE1 309 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ELP5Q8TE02 316 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 IMP4Q96G21 291 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 COG8Q96MW5 612 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 RBP7Q96R05 134 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ENY2Q9NPA8 101 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 FARS2O95363 451 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 IFNA1P01562 189 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 PRKXP51817 358 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ACTA2P62736 377 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ACTG2P63267 376 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 CCINQ13939 588 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ZNF550Q7Z398 422 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 KLBQ86Z14 1044 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ARL14Q8N4G2 192 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 TMEM156Q8N614 296 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 PBDC1Q9BVG4 233 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 NUFIP1Q9UHK0 495 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 OXTRP30559 389 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 CDKN2CP42773 168 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ALG10BQ5I7T1 473 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ERN2Q76MJ5 926 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 OR5B12Q96R08 314 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 SMG9Q9H0W8 520 aaKnown RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 SACM1LQ9NTJ5 587 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 CAPN14A8MX76 684 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 UPK1BO75841 260 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 CRYZL1O95825 349 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 IFNA5P01569 189 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 ZNF16P17020 682 aaPredicted RBP13.35□□□□□ -0.27
SNPH-201ENST00000381867 CDNFQ49AH0 187 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 DTX3Q8N9I9 347 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 TCEAL3Q969E4 200 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 DHDHQ9UQ10 334 aa13.35□□□□□ -0.27
SNPH-201ENST00000381867 HEPACAM2A8MVW5 462 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms