RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LGI4Q8N135 537 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 OR2L13Q8N349 312 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 DHRSXQ8N5I4 330 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 GPR32P1Q8NGA4 272 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 APOBEC4Q8WW27 367 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 CYGBQ8WWM9 190 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 TANKQ92844 425 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 FBXL20Q96IG2 436 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 OR7D2Q96RA2 312 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 RBM4BQ9BQ04 359 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 RBM4Q9BWF3 364 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 SPRTNQ9H040 489 aaPredicted RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 EPB41L1Q9H4G0 881 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 DNAAF2Q9NVR5 837 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 CLCA2Q9UQC9 943 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 ZNF451Q9Y4E5 1061 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 CLIC3O95833 236 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 ATP1B1P05026 303 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 NR2F1P10589 423 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 THRBP10828 461 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 DNAJA1P31689 397 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 CAPGP40121 348 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 ADARB1P78563 741 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 FAM53BQ14153 422 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 HLA-BQ31612 363 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 ZIK1Q3SY52 487 aaPredicted RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 PEAR1Q5VY43 1037 aaPredicted RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 METTL25Q8N6Q8 603 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 SAP25Q8TEE9 199 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 GEMIN6Q8WXD5 167 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 GABARAPL1Q9H0R8 117 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 DDX18Q9NVP1 670 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 HCN3Q9P1Z3 774 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 IFT80Q9P2H3 777 aaPredicted RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 SH3GLB1Q9Y371 365 aa16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 SAMHD1Q9Y3Z3 626 aaKnown RBP16.28■□□□□ 0.2
THUMPD2-201ENST00000378727 MN1Q10571 1320 aaPredicted RBP16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 FITM1A5D6W6 292 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 TMEM247A6NEH6 219 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 H3BMH7 237 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 CHRM4P08173 479 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 FPR1P21462 350 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 MYF6P23409 242 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 SEPHS1P49903 392 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 ANXA11P50995 505 aaKnown RBP16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 GPLD1P80108 840 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 INAVAQ3KP66 663 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 TRMT12Q53H54 448 aaKnown RBP16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 FHL5Q5TD97 284 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 WDR53Q7Z5U6 358 aaPredicted RBP16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 PLXDC1Q8IUK5 500 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 DOK4Q8TEW6 326 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 RBCK1Q9BYM8 510 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 AMBRA1Q9C0C7 1298 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 REEP1Q9H902 201 aa16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 TMEFF2Q9UIK5 374 aaPredicted RBP16.27■□□□□ 0.2
THUMPD2-201ENST00000378727 NINQ8N4C6 2090 aa16.27■□□□□ 0.19
THUMPD2-201ENST00000378727 PDE9AO76083 593 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 NSA2O95478 260 aaKnown RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 NELFEP18615 380 aaKnown RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 RRM2P31350 389 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 MAT1AQ00266 395 aaKnown RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 TCTE1Q5JU00 501 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 GARNL3Q5VVW2 1013 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 MFSD12Q6NUT3 480 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 CCDC74AQ96AQ1 378 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 ZC3H10Q96K80 434 aaKnown RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 COL21A1Q96P44 957 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 MS4A4EQ96PG1 132 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 ZNF300Q96RE9 604 aaPredicted RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 ACTRT3Q9BYD9 372 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 TOR3AQ9H497 397 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 BCL2L10Q9HD36 194 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 IRAK4Q9NWZ3 460 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 SEMA5BQ9P283 1151 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 GPC6Q9Y625 555 aaPredicted RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 LY6G6EA0A0G2JKS1 128 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 TMEM221A6NGB7 291 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 M0R296 226 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 ASNA1O43681 348 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 ALBP02768 609 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 FESP07332 822 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 PPP2R1BP30154 601 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 YAP1P46937 504 aaKnown RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 CRISP3P54108 245 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 HSD11B2P80365 405 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 SYT16Q17RD7 645 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 SNAP47Q5SQN1 464 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 USP51Q70EK9 711 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 CYP4Z1Q86W10 505 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 CARFQ8N187 725 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 RDH12Q96NR8 316 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 ZNF607Q96SK3 696 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 MBOAT4Q96T53 435 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 PTGFRNQ9P2B2 879 aa16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 TMEM184BQ9Y519 407 aaPredicted RBP16.26■□□□□ 0.19
THUMPD2-201ENST00000378727 U3KQA8 63 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms