RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 FAM13CQ8NE31 585 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 C17orf47Q8NEP4 570 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 PAQR8Q8TEZ7 354 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 APIPQ96GX9 242 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 SHCBP1LQ9BZQ2 653 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 ROPN1BQ9BZX4 212 aaPredicted RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 ROPN1Q9HAT0 212 aaPredicted RBP15.52■□□□□ 0.08
HMGN4-201ENST00000377575 IL1RL2Q9HB29 575 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 SH2D2AQ9NP31 389 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 PFDN4Q9NQP4 134 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 GIMAP4Q9NUV9 329 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 LGALS13Q9UHV8 139 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 DLGAP4Q9Y2H0 992 aa15.52■□□□□ 0.08
HMGN4-201ENST00000377575 ZNF407Q9C0G0 2248 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 A0A1B0GTH9 108 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 FAM166BA8MTA8 275 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 GLSO94925 669 aaPredicted RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 UROSP10746 265 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 PTGS2P35354 604 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 NR0B1P51843 470 aaKnown RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 BTKQ06187 659 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF763Q0D2J5 394 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 PCLAFQ15004 111 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 NTRK2Q16620 822 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 PRICKLE4Q2TBC4 344 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 HIST2H2BCQ6DN03 193 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 GALNT18Q6P9A2 607 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 SCIMPQ6UWF3 145 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 C10orf107Q8IVU9 208 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 CHERPQ8IWX8 916 aaKnown RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 SRRM1Q8IYB3 904 aaKnown RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF808Q8N4W9 903 aaPredicted RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF615Q8N8J6 731 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 OR52N2Q8NGI0 321 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 ITLN2Q8WWU7 325 aaPredicted RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 TRMOQ9BU70 441 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 EBPLQ9BY08 206 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 C12orf65Q9H3J6 166 aaKnown RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 ZDHHC11Q9H8X9 412 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 PLSCR2Q9NRY7 297 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 SIRT5Q9NXA8 310 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 MAT2BQ9NZL9 334 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 CNIH4Q9P003 139 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 ENTPD4Q9Y227 616 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 MEMO1Q9Y316 297 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 PLLPQ9Y342 182 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 V9GYY5 206 aaPredicted RBP15.51■□□□□ 0.07
HMGN4-201ENST00000377575 UNC79Q9P2D8 2635 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 DNAJC13O75165 2243 aa15.51■□□□□ 0.07
HMGN4-201ENST00000377575 TP53I11O14683 189 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 TRIM13O60858 407 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 RSL1D1O76021 490 aaKnown RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 ANXA4P09525 319 aaPredicted RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 DNASE1L1P49184 302 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 SMSP52788 366 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 KCNJ2P63252 427 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 MAP4K2Q12851 820 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 RPS6KA2Q15349 733 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 TBCELQ5QJ74 424 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 TRIM46Q7Z4K8 759 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 MRGPRGQ86SM5 289 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 HOMEZQ8IX15 550 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 FAM109AQ8N4B1 249 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 BANPQ8N9N5 519 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 OR10G3Q8NGC4 313 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 FAM57AQ8TBR7 257 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 C16orf78Q8WTQ4 265 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 C11orf24Q96F05 449 aaPredicted RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 CNRIP1Q96F85 164 aaPredicted RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF681Q96N22 645 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 SMC6Q96SB8 1091 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 RRAGDQ9NQL2 400 aaPredicted RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 EHD3Q9NZN3 535 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 HEY2Q9UBP5 337 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 BCAP29Q9UHQ4 241 aa15.5■□□□□ 0.07
HMGN4-201ENST00000377575 BOKQ9UMX3 212 aaPredicted RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 CHCHD2Q9Y6H1 151 aaPredicted RBP15.5■□□□□ 0.07
HMGN4-201ENST00000377575 PCNX1Q96RV3 2341 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 TPOP07202 933 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 GPX3P22352 226 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 PIGAP37287 484 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 RPP38P78345 283 aaKnown RBP15.49■□□□□ 0.07
HMGN4-201ENST00000377575 HYAL4Q2M3T9 481 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 PRAMEF20Q5VT98 475 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 FGD2Q7Z6J4 655 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 CD163Q86VB7 1156 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 ADCY4Q8NFM4 1077 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 OR5M3Q8NGP4 307 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 CDC26Q8NHZ8 85 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 FAM76AQ8TAV0 307 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 ZNF675Q8TD23 568 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 PHF10Q8WUB8 498 aaKnown RBP15.49■□□□□ 0.07
HMGN4-201ENST00000377575 ADIPOR1Q96A54 375 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 EXOSC8Q96B26 276 aaKnown RBP15.49■□□□□ 0.07
HMGN4-201ENST00000377575 FAM111AQ96PZ2 611 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 DEFB127Q9H1M4 99 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 TUBA8Q9NY65 449 aaPredicted RBP15.49■□□□□ 0.07
HMGN4-201ENST00000377575 PRODH2Q9UF12 536 aa15.49■□□□□ 0.07
HMGN4-201ENST00000377575 NPFFR2Q9Y5X5 522 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms