RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 RNF6Q9Y252 685 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 A0A088AWK7 358 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 SAGE2PA6NJ88 616 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 PIP5K1BO14986 540 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 TMPRSS11DO60235 418 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 CDC123O75794 336 aaPredicted RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 SNUPNO95149 360 aaKnown RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 JUNP05412 331 aaKnown RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 ZNF10P21506 573 aaPredicted RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 SSR2P43308 183 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 LIM2P55344 173 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 FOLH1Q04609 750 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 CMPK2Q5EBM0 449 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 MRM1Q6IN84 353 aaKnown RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 PAOXQ6QHF9 649 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 TGIF2LYQ8IUE0 185 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 SULF2Q8IWU5 870 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 KIF2BQ8N4N8 673 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 C1orf52Q8N6N3 182 aaKnown RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 ZFP62Q8NB50 900 aaPredicted RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 OR2T11Q8NH01 316 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 CKAP2Q8WWK9 683 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 C11orf24Q96F05 449 aaPredicted RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 MAPKAP1Q9BPZ7 522 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 RBCK1Q9BYM8 510 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 COPS7BQ9H9Q2 264 aaPredicted RBP11.28□□□□□ -0.6
LSM2-208ENST00000375661 AHSPQ9NZD4 102 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 DAPP1Q9UN19 280 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
LSM2-208ENST00000375661 NKX2-6A6NCS4 301 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 FAM90A27PA6NNH2 459 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 SLC28A1O00337 649 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 CYR61O00622 381 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 PEX1O43933 1283 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 RSL1D1O76021 490 aaKnown RBP11.27□□□□□ -0.61
LSM2-208ENST00000375661 CHEK2O96017 543 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 GBAP04062 536 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 KLK1P06870 262 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 LINC00032P0C843 101 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 PRPH2P23942 346 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 HNRNPFP52597 415 aaKnown RBP11.27□□□□□ -0.61
LSM2-208ENST00000375661 IST1P53990 364 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 HNRNPH2P55795 449 aaKnown RBP11.27□□□□□ -0.61
LSM2-208ENST00000375661 RAB38P57729 211 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 RAE1P78406 368 aaKnown RBP11.27□□□□□ -0.61
LSM2-208ENST00000375661 BTKQ06187 659 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 SLAMF1Q13291 335 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 KIAA0040Q15053 153 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 XKR7Q5GH72 579 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 COMMD6Q7Z4G1 85 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 NUDT13Q86X67 352 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 ARFGAP2Q8N6H7 521 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 TMEM52Q8NDY8 209 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 NFAM1Q8NET5 270 aaPredicted RBP11.27□□□□□ -0.61
LSM2-208ENST00000375661 LRRC8CQ8TDW0 803 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 DYDC1Q8WWB3 177 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 C3orf30Q96M34 536 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 MAGEB18Q96M61 343 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 PTCHD1Q96NR3 888 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 CSF3RQ99062 836 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 DEFB126Q9BYW3 111 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 NMRK1Q9NWW6 199 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 SIRT5Q9NXA8 310 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 ADAM29Q9UKF5 820 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 ASB4Q9Y574 426 aa11.27□□□□□ -0.61
LSM2-208ENST00000375661 PRRC2AP48634 2157 aaKnown RBP11.26□□□□□ -0.61
LSM2-208ENST00000375661 DNAJC13O75165 2243 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 TCRBV16S1A1N1A0A5B0 115 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 HS6ST1O60243 411 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
LSM2-208ENST00000375661 SKAP2O75563 359 aaPredicted RBP11.26□□□□□ -0.61
LSM2-208ENST00000375661 RNH1P13489 461 aaKnown RBP11.26□□□□□ -0.61
LSM2-208ENST00000375661 CLCN2P51788 898 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 TERF2Q15554 542 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 IMPG1Q17R60 797 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 SPDYAQ5MJ70 313 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 RGS9BPQ6ZS82 235 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 GPALPP1Q8IXQ4 340 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 DDIASQ8IXT1 998 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 CYP4Z2PQ8N1L4 340 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 UCN3Q969E3 161 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 UCK2Q9BZX2 261 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 SLCO1B3Q9NPD5 702 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 PRDM9Q9NQV7 894 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 FBXW2Q9UKT8 454 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 EDARQ9UNE0 448 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 ATG4BQ9Y4P1 393 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 ARHGAP21Q5T5U3 1957 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 SPG11Q96JI7 2443 aa11.26□□□□□ -0.61
LSM2-208ENST00000375661 EML6Q6ZMW3 1958 aa11.25□□□□□ -0.61
LSM2-208ENST00000375661 NAV3Q8IVL0 2385 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms